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View Structure Prediction Details

Protein: CE34714
Organism: Caenorhabditis elegans
Length: 517 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34714.

Description E-value Query
Range
Subject
Range
CE27100 - status:Partially_confirmed UniProt:Q18267 protein_id:AAC46658.2
218.0 [0..8] [517..12]

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Predicted Domain #1
Region A:
Residues: [1-517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLHMPTLN LVLTVVGAGF ILSIQSLYYI KVFFDEFHLP PSYLKVVQIL FLVWNAVNDP  60
   61 MMGYMQDLGF CGMKWIMDRR KVVLYAGPVF AASFLLFWFP WSTSIGWVTA LHLLVSLFIY 120
  121 DTLLTLVLSA YCGLCVENSR SHEDRVRVIV YGEIFTIVAG LLIYPLETMP HTNEHYWLFQ 180
  181 LCCVVIACIS AALMAFSGYH LKVERPINED HQLEKFQEGE VVKETKQDGW KNALTVSLQI 240
  241 AKEPRFICLV GAQFFRILRF IANENFLIVF TEGLLVNNGF FEKNSGSLGL FYVLARSSGS 300
  301 VSRFFLICEH DQFQILFLLL WVPTNRFGTQ AVIQSLNILS IFNVIFILYA GVNNITAIAI 360
  361 FIILENAISR CGWQGFYIVV AGEVVDTDMK TNNRKTPFST IIFTLKALFN KPADQLAPVF 420
  421 VLSLFLERGG YPQLTVPCQQ FYEDNYSNST MFNSTSMEST TLSGYPTVAE CTNYSQWMFL 480
  481 ALAIFPAICA IGESMFVAFD QYWRRHIKGK TGHLGDD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.795545041075205 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle