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Protein Overview: cup-5

General Information:
Name(s) found: cup-5 / CE34585 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00000846 locus:cup-5 status:Confirmed UniProt:Q8T877 protein_id:AAP82642.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    cytoplasmic membrane-bounded vesicle [IDALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    apoptosis [IMPLink to PubMed article]
    regulation of endocytosis [IMPLink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    calcium channel activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLEQIPLES MSRRSTTDRS DFNDNASNAS SNASRRPTIN FQEIMEDLPH HERETGERLR  60
   61 RHLQFFFMNP MEKWKVRHQL PYKLVLQVLK IVFVTMQLIL FAEMRMSHVD FLEDTTTVMR 120
  121 HRFLKEWNDD RDALQYPPAE GRYSVYDDQG LSEHLSFLIN SYYSIRNDSF ASFSYDVVSH 180
  181 PSGNLGAQIS FESIPPIEVL IDRISNVTVN NNTYNFDIRE VKDTKRLNLT ETEVFQIGQS 240
  241 DDAVRDILAT RGITFLPEDA LKISTVQFKF RLRTIHYSPT AGDQKPECYK ISVSIKFDNS 300
  301 RHTGQVHVTL STVVSYVNVC NGRIIKVSGV GWSFDTLLIG GTDIFVLILC ILSLILCCRA 360
  361 LIKAHLLQIK TSDYFENVLK NKITVTDQLD FLNLWYVMIV VNDALIIIGT VAKISIEFQD 420
  421 FDNSLFTLTS IFLGMGALLV YVGVLRYFGF FSQYNILMLT LKRSAPNIMR FMTCAIVLYA 480
  481 GFLIAGWVII GPYSMKFRTL AESSEALFSL LNGDDMFATF YTINDSNTVI KVFGTVYIYL 540
  541 FVSLFIYVVL SLFIAIIMDA YEVVKDRYSD GLRAIEKRGC LRDFVESNPP PSELGSPTTR 600
  601 SAYAPSNLLN LVFNHSPTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] deduced N/A No confident structure predictions are available.
    2 View Details [167..619] PSI-BLAST 44.154902 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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