Protein Overview: cic-1

General Information:
Name(s) found:	cic-1 / CE34571 [WormBase]
Description(s) found: Found 17 descriptions. SHOW ALL	WBGene00000506 locus:cic-1 Cyclin-C status:Confirmed UniProt:Q9TYP2 protein_id:CCD72187.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	302 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	cell cycle [IEA]
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNFWKSSH CQQWIFDKTE IWKQRAEDMK IYNEEEYNRL NIFWANFITA VATEGAHSQA  60
   61 NVGCKLRQQV IATAIIYFKR FYLRQSFRDM CPFLVASTAL FLACKVEEHT TLSVSSFLKN 120
  121 TAIVLPKRWG VTFETTSTKN GVVYDSEFIL VEILDCCLVV HHASRPMFEL LEDLKQFTQQ 180
  181 STIANQPIKD LEAIEAQCQK VANDSLRCDV SLIFPPHVIG LSSIMVAMEL MGRGEELEAW 240
  241 LVEVDTDFEK VTDCVEQIYK MYTLWKSFDE KEEVKKLMAK LPKPNQQPPP QQQHQHQQGY 300
  301 HL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..302]	PSI-BLAST	49.154902	No description for 2g9xB was found.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
general RNA polymerase II transcription factor activity	8.12427628405368	bayes_pls_golite062009
cyclin-dependent protein kinase activity	3.64545486450168	bayes_pls_golite062009
cyclin-dependent protein kinase regulator activity	3.42865021590497	bayes_pls_golite062009
protein kinase regulator activity	2.96093967361332	bayes_pls_golite062009
transcription regulator activity	2.795846725429	bayes_pls_golite062009
kinase regulator activity	2.79045953713534	bayes_pls_golite062009
binding	2.4204867358489	bayes_pls_golite062009
nucleic acid binding	2.04886889839181	bayes_pls_golite062009
RNA polymerase II transcription factor activity	2.00665312545368	bayes_pls_golite062009
DNA binding	1.94297811210385	bayes_pls_golite062009
protein binding	1.47106731485576	bayes_pls_golite062009
transcription factor activity	1.21921365719206	bayes_pls_golite062009
transcription factor binding	0.749278791251235	bayes_pls_golite062009
enzyme regulator activity	0.729629809946521	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.36347576272001	bayes_pls_golite062009
transcription coactivator activity	0.138191616709499	bayes_pls_golite062009
transcription activator activity	0.0696060248241566	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.87

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle