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Protein Overview: frm-1

General Information:
Name(s) found: frm-1 / CE34143 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00001488 locus:frm-1 status:Confirmed UniProt:G5EFD6 protein_id:CAB05004.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 634 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    extrinsic to membrane [IEALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: protein amino acid dephosphorylation [IEALink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    Molecular Function: actin binding [IEALink to PubMed article]
    protein tyrosine phosphatase activity [IEALink to PubMed article]
    structural molecule activity [IEALink to PubMed article]
    cytoskeletal protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTDRDPGDQ KHPTTSQQPR DSKMQLAKVL LPDGVQKEFE VNKNSEGEAL FRQVTRDLSI  60
   61 EEREYFSLCF YDKDEGTRHW LYNDKNIAKQ IKGLPWEFSF EVKFYPTTPT TIVDDHARYY 120
  121 VFLQLRRDLL TGRLPATADT HSLLGSFVAQ IEFGDAPAEM TDAYEQFIVA SKLVPSAQAN 180
  181 PETYKKIVDL HREMRGQTPS EAENQFLDHC KHLALYGIHL FKAISDKDKK PVDVGIGAAG 240
  241 INIYQDEQKT HSFSWQNIIK IGYRRTYFSI KLKAGTVEKN EKTLYFKLPN HVAAKRTWKC 300
  301 AVEHHTFFRL IQPEDKTHKS FFNFGSQRFR YQGRTQFQTK IASQMFDKPS TVDRAPSAMS 360
  361 QPIATAENQK LQTLNLTDSE LEQRQFERDK SNKKDKKKRK KGENETSGET SDSEHDEKRE 420
  421 FAIVEFEPES GQPYTTVSTW QETSDLPEQV EVYTDENGRQ ITRTVKSSQV KHTVQTQSFQ 480
  481 NYIVDGDQVP VGVVDVERSR EQLTPLGQKA SSSTSSDVQN GGGENGGIVE TQTRTMTYEA 540
  541 QGGENSAPPG WAEEGLGEYV SSKSVTQGNR TIETITYKTE KDGIVETHVE HRVTIHSDGD 600
  601 IDHDAELSQA ILEATQMNPD MVVEKIEVRQ ETTQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..313] PSI-BLAST 80.045757 No description for 2he7A was found.
    2 View Details [314..566] deduced N/A No confident structure predictions are available.
    3 View Details [567..634] Pfam 41.677781 No description for PF05902.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle