Protein Overview: CE34120

General Information:
Name(s) found:	CE34120 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00012828 status:Partially_confirmed UniProt:Q9XWN1 protein_id:CAA21620.2 [WormBase] gi\|72001168\|ref\|NP_507806.2\| hypothetical protein Y43F8C.6 [Caenorhabditis elegans] [NCBI NR] gi\|32440606\|emb\|CAA21620.2\| C. elegans protein Y43F8C.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] [wormpep104.fasta] Hypothetical protein Y43F8C.6 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] CE34120 WBGene00012828 status:Partially_confirmed TR:Q9XWN1 protein_id:CAA21620.2 [wormpep150.fasta] 34120 WBGene00012828 status:Partially_confirmed TR:Q9XWN1 protein_id:CAA21620.2 [wormpep130-phg-ecoli-orf-rand.fasta] status:Partially_confirmed TR:Q9XWN1 protein_id:CAA21620.2 [wormpep115.fasta.reversed] CE34120 WBGene00012828 status:Partially_confirmed UniProt:Q9XWN1_CAEEL protein_id:CAA21620.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE34120 WBGene00012828 status:Partially_confirmed UniProt:Q9XWN1_CAEEL protein_id:CAA21620.2\| [wormORF-contam.fasta] Y43F8C.6 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE34120 WBGene00012828 status:Partially_confirmed UniProt:Q9XWN1 protein_id:CAA21620.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] Isoform of H8ESF1, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y43F8C.6 PE=1 SV=2 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	422 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IEA]
Biological Process:	tRNA aminoacylation for protein translation [IEA] translation [IEA]
Molecular Function:	nucleotide binding [IEA] ATP binding [IEA] aminoacyl-tRNA ligase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSRNYENQQ QQQGGHVPPV ASNTVTIGTS ANSQVRIGPS TQIRSLSNVA LRHHQPVPIR  60
   61 KIVHHDTGGG PQFQPPKDEP IDNSMLDYQA STSSGPLIAT SSQNSNSFQQ YQRGGPGGSS 120
  121 AMSSGALVMN SSNNGAANNN MMAMDQPAPV NLAAKVAEVF LTAGHAFQKL GDLTLQLHTT 180
  181 TDADESKWSE KEVDNLKNAL TRFAHELDQI STCVANRTTK HIKNDIKRRH MMTSSEDPSS 240
  241 ISGGPSAGGS HHPKRMAMSS SGGGAGASGP SSSAPGPSSS YSTGAGGGAL LSTGHAVPIM 300
  301 GAGGTGGHKR IMQPIGKMVA TRAVIPTRYT VAPSSSTSTV ILNSHSSPGG GGMPHLQSQN 360
  361 LSASSAPPPL PRGVVPTTTV TRVVAPHTLL HQGPPIKDLP PASSLIPTSW RKKSPETEFV 420
  421 KN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	hcp-1	hcp1 IP from december2004	Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..148]	deduced	N/A	No confident structure predictions are available.
2	View Details	[149..275]	MSA	6.01699	View MSA. No confident structure predictions are available.
3	View Details	[276..422]	deduced	N/A	No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.64

Protein Overview: CE34120

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: