YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ntl-3

General Information:
Name(s) found: ntl-3 / CE33892 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00003826 locus:ntl-3 status:Partially_confirmed UniProt:G5EFX8 protein_id:CAB60507.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    Molecular Function: transcription regulator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKRKLLAE IDKCFKKIDE GVELFEETME KMHEANSDNQ RDKYQDDLKK EIKKLQRLRD  60
   61 QVKNWQNASE IKDKDKLNSY RKLIEQRMEQ FKDVERENKT KPHSKLGLSA EEKLDPKEKE 120
  121 KAETMDWIQH QIRSLNEEVD RTEMQLESLS NTDTGKGKRG KKEDAKTKNE REKRVEGLKH 180
  181 HLERINFHIE KLEICMRMIS NESLNAKMVL ETLKEPIETY VEMMNEEDSE EADNYDPDDA 240
  241 YDELNLEKLC QQIGGVNVAS VDDEHRENGH ELGIDTAESG AVSGSRHTSG ENGQPPSPAG 300
  301 RRIVPLSMPS PHAVTPELKR LASKDSNVDR PRTPPVTPAS AAPPPPGIPY NSVAAGRSTT 360
  361 TPVPSTPISA NSPAPSLAQA APIAAASPVF PPAAAAASKP VLAQSVSEMP QKKESITSTT 420
  421 SRGSAAAPAT TTTTTTTTTS SEPAEVPLVV QQTVSETFVN GVDSPAAATR LTQQERQQQL 480
  481 QQQHHHQSTI IPTTPTTTTT SSSMLGGMMS TDDPAAALQA ALNMAAASQQ AVATGPKRAH 540
  541 IPAWLGASPL GRTSMTQEFD GQLAALELAC AKATFPLDSE KPRNYLSKVS FPVPSWYGQT 600
  601 APNTSDSLEY YLRLAPDTLF FIFYYMEGTR AQLLAAKALK KLSWRFHTKY LTWFQRHEEP 660
  661 KQITDDYEQG TYVYFDFEKW SQRKKESFTF EYKFLEDKEF D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 11.522879 Tropomyosin
    2 View Details [272..355] deduced N/A No confident structure predictions are available.
    3 View Details [356..564] MSA 3.300997 View MSA. No confident structure predictions are available.
    4 View Details [565..701] Pfam 30.853872 No description for PF04153.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle