| Protein: | ntl-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 701 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ntl-3.
| Description | E-value | Query Range |
Subject Range |
|
|
364.0 | [0..1] | [701..1] |
|
Region A: Residues: [1-271] |
1 11 21 31 41 51
| | | | | |
1 MAEKRKLLAE IDKCFKKIDE GVELFEETME KMHEANSDNQ RDKYQDDLKK EIKKLQRLRD 60
61 QVKNWQNASE IKDKDKLNSY RKLIEQRMEQ FKDVERENKT KPHSKLGLSA EEKLDPKEKE 120
121 KAETMDWIQH QIRSLNEEVD RTEMQLESLS NTDTGKGKRG KKEDAKTKNE REKRVEGLKH 180
181 HLERINFHIE KLEICMRMIS NESLNAKMVL ETLKEPIETY VEMMNEEDSE EADNYDPDDA 240
241 YDELNLEKLC QQIGGVNVAS VDDEHRENGH E
|
| Detection Method: |  |
| Confidence: | 11.522879 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [272-355] |
1 11 21 31 41 51
| | | | | |
1 LGIDTAESGA VSGSRHTSGE NGQPPSPAGR RIVPLSMPSP HAVTPELKRL ASKDSNVDRP 60
61 RTPPVTPASA APPPPGIPYN SVAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [356-564] |
1 11 21 31 41 51
| | | | | |
1 GRSTTTPVPS TPISANSPAP SLAQAAPIAA ASPVFPPAAA AASKPVLAQS VSEMPQKKES 60
61 ITSTTSRGSA AAPATTTTTT TTTTSSEPAE VPLVVQQTVS ETFVNGVDSP AAATRLTQQE 120
121 RQQQLQQQHH HQSTIIPTTP TTTTTSSSML GGMMSTDDPA AALQAALNMA AASQQAVATG 180
181 PKRAHIPAWL GASPLGRTSM TQEFDGQLA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [565-701] |
1 11 21 31 41 51
| | | | | |
1 ALELACAKAT FPLDSEKPRN YLSKVSFPVP SWYGQTAPNT SDSLEYYLRL APDTLFFIFY 60
61 YMEGTRAQLL AAKALKKLSW RFHTKYLTWF QRHEEPKQIT DDYEQGTYVY FDFEKWSQRK 120
121 KESFTFEYKF LEDKEFD
|
| Detection Method: | |
| Confidence: | 30.853872 |
| Match: | PF04153.9 |
| Description: | No description for PF04153.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
