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Protein Overview: csn-3

General Information:
Name(s) found: csn-3 / CE33861 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00000815 locus:csn-3 COP9 signalosome complex subunit 3 status:Partially_confirmed UniProt:Q9N425 protein_id:CCD70246.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: signalosome [IPILink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    establishment of mitotic spindle orientation [IMPLink to PubMed article]
    establishment of mitotic spindle localization [IMPLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    ubiquitin-dependent protein catabolic process [IDALink to PubMed article][IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTFFNKLFT GASSSSSAAA SSGMDLGSME SLCAAINELC SEKHVSENVG ELAAGIVRKN  60
   61 KELFEKKSND VEAFLLHCSP NVGSAAMVAA IKGMFDTSAA KNNETGTDRA VELLNHYVDE 120
  121 NNFVGGHLKL VPEIIFPLLR DVGLYCLEKK NKPEIGQRII MKALGSMFPR NGSNAPNVLT 180
  181 SAHGVLFACA LETKDYASVE PFIDLHVDEI ANENCIQDQE KSDNRERDFG DVFLGRMKKG 240
  241 AAFGSQPVAH NPHLHPKYVL DYLYNGACIL IELKRFEDAL FLLEICVGMP AFSVQDQHLD 300
  301 SFKKYVLISL ILKGKVDVTE NGDKSAIRHF KTKSPEYKQF SEIRFSRSSN THSAVESLVK 360
  361 SAKDRLRKDG NTEIAKYLVV EMKKKTIMSL TRMFTSIRIS EIEELAFLKS RDQVTELIGQ 420
  421 LVEEQRITVR IDGDMVFWTE LSPVPSKNDV ENKIRIVDHL NTLLHEKNTT MKAGSGRMRP 480
  481 SVMYNEDEGL SMPPTESKFF S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] MSA 2.298992 View MSA. No confident structure predictions are available.
    2 View Details [123..318] MSA 6.467995 View MSA. No confident structure predictions are available.
    3 View Details [319..501] PSI-BLAST 9.69897 Solution structure of the PCI domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  2.04123976602801 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.8189108757228 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.76517313697689 bayes_pls_golite062009
  • DNA binding
    		•  1.64595632095392 bayes_pls_golite062009
  • transcription factor activity
    		•  1.00475531374083 bayes_pls_golite062009
  • protein binding
    		•  0.242608912344822 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle