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Protein Overview: atf-7

General Information:
Name(s) found: atf-7 / CE33597 [WormBase]
Description(s) found:
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  • WBGene00000223 locus:atf-7 status:Confirmed UniProt:Q9U3R1 protein_id:CAB63430.2 [WormBase]
  • gi|71981431|ref|NP_497914.2| ATF (cAMP-dependent transciption factor) family member (atf-7) [Caenorhabditis elegans] [NCBI NR]
  • gi|29603336|emb|CAB63430.2| C. elegans protein C07G2.2a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein C07G2.2a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33597 WBGene00000223 locus:atf-7 bZIP transcription factor status:Confirmed TR:Q9U3R1 protein_id:CAB63430.2 [wormpep150.fasta]
  • 33597 WBGene00000223 locus:atf-7 bZIP transcription factor status:Confirmed TR:Q9U3R1 protein_id:CAB63430.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • bZIP transcription factor status:Confirmed TR:Q9U3R1 protein_id:CAB63430.2 [wormpep115.fasta.reversed]
  • CE33597 WBGene00000223 locus:atf-7 bZIP transcription factor status:Confirmed UniProt:Q9U3R1_CAEEL protein_id:CAB63430.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33597 WBGene00000223 locus:atf-7 bZIP transcription factor status:Confirmed UniProt:Q9U3R1_CAEEL protein_id:CAB63430.2| [wormORF-contam.fasta]
  • ATF (cAMP-dependent transciption factor) family member (atf-7) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33597 WBGene00000223 locus:atf-7 bZIP transcription factor status:Confirmed UniProt:Q9U3R1 protein_id:CAB63430.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33597 WBGene00000223 locus:atf-7 status:Confirmed UniProt:Q9U3R1 protein_id:CAB63430.2 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q86MD3, ATF (CAMP-dependent transcription factor) family OS=Caenorhabditis elegans GN=atf-7 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVVTTTSMQ SDSKKRVQLM GDTTSPFSLD TPNPKLMFTP LDLPTTAELM QRCLAVNPFE  60
   61 AKFREANQKI SSGSMQPNTS GANQSLEALE ANGGSQFSGS NAGTMSDLLL KIPQASLQHS 120
  121 PGIFSNMLLN AGDSEGTTRE NLKTADISKL LSVAGDFSAQ APRTADVLNA VLDMHSDRLH 180
  181 TINYLNNKPD FSALLRSPSS SAPNSASVLT NAMAIPSTSG APFPGTTLLV PPKTVSSYHS 240
  241 PLGASSQPPS TQKSPADGSW DHINGEKQIK KEIPYFNDDA MMLMERSNMS SSGSDQDQSA 300
  301 DMSNAGSTAS TSTGNPVGRP QNGTPGRGRG RGRSTTADMQ PDERRNTILE RNKAAAVRYR 360
  361 KRKKEEHDDM MGRVQAMEAE KNQLLTQNQV LRRELERVTA LLTERESRCV CLKGVPMSDE 420
  421 QHADHHHRNT NGMYSGSDML NGLGQINGMQ LKLPKLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 9.172997 View MSA. No confident structure predictions are available.
    2 View Details [188..332] deduced N/A No confident structure predictions are available.
    3 View Details [333..457] PSI-BLAST 12.0 CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle