| Protein: | atf-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atf-7.
| Description | E-value | Query Range |
Subject Range |
|
|
206.0 | [0..19] | [449..56] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MSVVTTTSMQ SDSKKRVQLM GDTTSPFSLD TPNPKLMFTP LDLPTTAELM QRCLAVNPFE 60
61 AKFREANQKI SSGSMQPNTS GANQSLEALE ANGGSQFSGS NAGTMSDLLL KIPQASLQHS 120
121 PGIFSNMLLN AGDSEGTTRE NLKTADISKL LSVAGDFSAQ APRTADVLNA VLDMHSDRLH 180
181 TINYLNN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [188-332] |
1 11 21 31 41 51
| | | | | |
1 KPDFSALLRS PSSSAPNSAS VLTNAMAIPS TSGAPFPGTT LLVPPKTVSS YHSPLGASSQ 60
61 PPSTQKSPAD GSWDHINGEK QIKKEIPYFN DDAMMLMERS NMSSSGSDQD QSADMSNAGS 120
121 TASTSTGNPV GRPQNGTPGR GRGRG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [333-457] |
1 11 21 31 41 51
| | | | | |
1 RSTTADMQPD ERRNTILERN KAAAVRYRKR KKEEHDDMMG RVQAMEAEKN QLLTQNQVLR 60
61 RELERVTALL TERESRCVCL KGVPMSDEQH ADHHHRNTNG MYSGSDMLNG LGQINGMQLK 120
121 LPKLQ
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 1gtwA |
| Description: | CRYSTAL STRUCTURE OF C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE TOM-1A PROMOTER |
Matching Structure (courtesy of the PDB): |
|
