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Protein Overview: CE33096

General Information:
Name(s) found: CE33096 [WormBase]
Description(s) found:
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  • WBGene00018491 locus:mdh-1 Malate dehydrogenase status:Confirmed UniProt:Q8IA49 protein_id:CCD71317.1 [WormBase]
  • gi|32566798|ref|NP_872153.1| hypothetical protein F46E10.10 [Caenorhabditis elegans] [NCBI NR]
  • gi|27374491|gb|AAO12427.1| Hypothetical protein F46E10.10b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE33096 WBGene00018491 status:Confirmed TR:Q8IA49 protein_id:AAO12427.1 [wormpep150.fasta]
  • 33096 WBGene00018491 status:Confirmed TR:Q8IA49 protein_id:AAO12427.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • lactate/malate dehydrogenase and Lactate/malate dehydrogenase precursor (29.1 kD) (5G996) [Caenorhabditis elegans]gi|27374491|gb|AAO12427.1| Hypothetical protein F46E10.10b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q8IA49 protein_id:AAO12427.1 [wormpep115.fasta.reversed]
  • CE33096 WBGene00018491 status:Confirmed UniProt:Q8IA49_CAEEL protein_id:AAO12427.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33096 WBGene00018491 status:Confirmed UniProt:Q8IA49_CAEEL protein_id:AAO12427.1| [wormORF-contam.fasta]
  • Hypothetical protein F46E10.10b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F46E10.10b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33096 WBGene00018491 status:Confirmed UniProt:Q8IA49 protein_id:AAO12427.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33096 WBGene00018491 locus:mdh-1 status:Confirmed UniProt:Q8IA49 protein_id:CCD71317.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE33096 WBGene00018491 locus:mdh-1 status:Confirmed UniProt:Q8IA49 protein_id:CCD71317.1 Malate dehydrogenase [wormpep246-ecoli-contam.fasta]
  • Isoform of Q9UAV5, Malate dehydrogenase OS=Caenorhabditis elegans GN=mdh-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: malate metabolic process [IEALink to PubMed article]
    cellular carbohydrate metabolic process [IEALink to PubMed article]
    glycolysis [IEALink to PubMed article]
    tricarboxylic acid cycle intermediate metabolic process [IEALink to PubMed article]
    Molecular Function: L-malate dehydrogenase activity [IEALink to PubMed article]
    malate dehydrogenase activity [IEALink to PubMed article]
    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    malate dehydrogenase (NADP+) activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPLRVLVT GAAGQIGYSI VIRIADGTVF GKEQPVELVL LDVPQCSNIL EGVVFELQDC  60
   61 ALPTLFSVVA VTDEKSAFTG IDYAFLVGAM PRREGMERKD LLAANVKIFK SQGKALAEYA 120
  121 KPTTKVIVVG NPANTNAFIA AKYAAGKIPA KNFSAMTRLD HNRALAQLAL KTGTTIGNVK 180
  181 NVIIWGNHSG TQFPDVTHAT VNKNGTETDA YAAVGDNAFL QGPFIATVQK RGGVIIEKRK 240
  241 LSSAMSAAKA ACDHIHDWHF GTKAVSLIIL KLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 70.69897 Malate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.14023531388481 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.35135191441759 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.289188075300681 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle