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View Structure Prediction Details

Protein: CE33096
Organism: Caenorhabditis elegans
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33096.

Description E-value Query
Range
Subject
Range
gi|67968888 - gi|67968888|dbj|BAE00801.1| unnamed protein product [Macaca fascicularis]
gi|109107092 - gi|109107092|ref|XP_001084747.1| PREDICTED: lactate dehydrogenase A isoform 6 [Macaca mulatta]
274.0 [0..5] [273..50]

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Predicted Domain #1
Region A:
Residues: [1-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPLRVLVT GAAGQIGYSI VIRIADGTVF GKEQPVELVL LDVPQCSNIL EGVVFELQDC  60
   61 ALPTLFSVVA VTDEKSAFTG IDYAFLVGAM PRREGMERKD LLAANVKIFK SQGKALAEYA 120
  121 KPTTKVIVVG NPANTNAFIA AKYAAGKIPA KNFSAMTRLD HNRALAQLAL KTGTTIGNVK 180
  181 NVIIWGNHSG TQFPDVTHAT VNKNGTETDA YAAVGDNAFL QGPFIATVQK RGGVIIEKRK 240
  241 LSSAMSAAKA ACDHIHDWHF GTKAVSLIIL KLE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 4mdhA
Description: Malate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.14023531388481 bayes_pls_golite062009
oxidoreductase activity 0.35135191441759 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.289188075300681 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle