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Protein Overview: vab-9

General Information:
Name(s) found: vab-9 / CE32938 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00006875 locus:vab-9 status:Confirmed UniProt:G5ED30 protein_id:CAA88880.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 211 amino acids

    Gene Ontology:
    Cellular Component: cell junction [IDALink to PubMed article]
    Biological Process: defense response [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAVQRTTIE AVSAVRPLKI ISLICLVIAV GLMIVALCST SWLKTGSFRT GLFKECTSTN  60
   61 EPTHAAPFPG APAPGSCHKP SRNSGFLTAA AVLLIVALFL TALSTIFNIV GLSKSDVRGK 120
  121 YRWYRIATMI SGFSVLLELT ALIMFPAAFY VKISDYGSRR NWEVDWSYGI AWGATLFTIG 180
  181 ATIMLICDKE HEEVYYKEKT IYNPPPELSD R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..69] MSA 3.314997 View MSA. No confident structure predictions are available.
    2 View Details [70..211] MSA 24.341996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle