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Protein Overview: shk-1

General Information:
Name(s) found: shk-1 / CE32771 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00014261 locus:shk-1 Potassium voltage-gated channel protein shk-1 status:Partially_confirmed UniProt:Q8I4B0 protein_id:CAD57716.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    ion channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFGGQRRCI ESSDDNDSID SMSIQQKNKE KEEWKWAQSL ARRLEQVLNV HPEKYQNGCS  60
   61 SQRPSRQPSP VEQLAPIRSH SADFGRAAEM ASGNSEEGKG MLLRNGDDRI RLPSPQRGTP 120
  121 DTSSTQGHPY TDQIVTINVS GMRFQTFEST LSRYPNSLLG DRNKRQHFFV SDTNEFFFDR 180
  181 HRTTSSSFTF EIRNYLFESI LYIYQSGGRV KRPEIVPIDI FLKEMRFFQM GDDLLEEFWI 240
  241 AEGYEKPKEV MMPNNKTQRK IWELMEYPDS SLSARIIAFI SIAVIALSII SFCWETVPSD 300
  301 IEEKPINNSA TAELLDEMDE KHYSPFFWIE LMCILWFTIE LILRFISCPC KVTFATSVLN 360
  361 IIDFVAIAPF FVNFFFADTS KSNSSMSFAV LRVLRLVRVF RVFKLSRHSV GLQILGKTFR 420
  421 SSVQEFCLLI FFMAIALVLF ASGMYFAEQG EPNSKFTSIP ASFWFVLVTM TTVGYGDLVP 480
  481 LSPFGKVVGG MCAMIGVLTL ALPVPIIVAN FKHFYRQENR LASMKSKGDD ADDDIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] deduced N/A No confident structure predictions are available.
    2 View Details [91..536] PSI-BLAST 83.221849 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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