| Protein: | shk-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
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Region A: Residues: [1-90] |
1 11 21 31 41 51
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1 MRFGGQRRCI ESSDDNDSID SMSIQQKNKE KEEWKWAQSL ARRLEQVLNV HPEKYQNGCS 60
61 SQRPSRQPSP VEQLAPIRSH SADFGRAAEM
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| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [91-536] |
1 11 21 31 41 51
| | | | | |
1 ASGNSEEGKG MLLRNGDDRI RLPSPQRGTP DTSSTQGHPY TDQIVTINVS GMRFQTFEST 60
61 LSRYPNSLLG DRNKRQHFFV SDTNEFFFDR HRTTSSSFTF EIRNYLFESI LYIYQSGGRV 120
121 KRPEIVPIDI FLKEMRFFQM GDDLLEEFWI AEGYEKPKEV MMPNNKTQRK IWELMEYPDS 180
181 SLSARIIAFI SIAVIALSII SFCWETVPSD IEEKPINNSA TAELLDEMDE KHYSPFFWIE 240
241 LMCILWFTIE LILRFISCPC KVTFATSVLN IIDFVAIAPF FVNFFFADTS KSNSSMSFAV 300
301 LRVLRLVRVF RVFKLSRHSV GLQILGKTFR SSVQEFCLLI FFMAIALVLF ASGMYFAEQG 360
361 EPNSKFTSIP ASFWFVLVTM TTVGYGDLVP LSPFGKVVGG MCAMIGVLTL ALPVPIIVAN 420
421 FKHFYRQENR LASMKSKGDD ADDDIA
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| Detection Method: | |
| Confidence: | 83.221849 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
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