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Protein Overview: shk-1

General Information:
Name(s) found: shk-1 / CE32769 [WormBase]
Description(s) found:
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  • WBGene00014261 locus:shk-1 Potassium voltage-gated channel protein shk-1 status:Confirmed UniProt:Q8I4B0 protein_id:CAA88477.2 [WormBase]
  • gi|32564068|ref|NP_496104.2| hypothetical protein ZK1321.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|25815095|emb|CAA88477.2| C. elegans protein ZK1321.2a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32769 WBGene00014261 potassium channel protein status:Partially_confirmed TR:Q09658 protein_id:CAA88477.2 [wormpep150.fasta]
  • 32769 WBGene00014261 potassium channel protein status:Partially_confirmed TR:Q09658 protein_id:CAA88477.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • k+ channel tetramerisation and ion transport protein family member (54.8 kD) (2K57) [Caenorhabditis elegans]gi|25815095|emb|CAA88477.2| Hypothetical protein ZK1321.2a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • potassium channel protein status:Partially_confirmed TR:Q09658 protein_id:CAA88477.2 [wormpep115.fasta.reversed]
  • CE32769 WBGene00014261 potassium channel protein status:Partially_confirmed UniProt:Q09658_CAEEL protein_id:CAA88477.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32769 WBGene00014261 potassium channel protein status:Partially_confirmed UniProt:Q09658_CAEEL protein_id:CAA88477.2| [wormORF-contam.fasta]
  • Hypothetical protein ZK1321.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • ZK1321.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32769 WBGene00014261 locus:shk-1 potassium channel protein status:Partially_confirmed UniProt:Q09658 protein_id:CAA88477.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE32769 WBGene00014261 locus:shk-1 potassium channel protein status:Partially_confirmed UniProt:Q09658_CAEEL protein_id:CAA88477.2 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • CE32769 WBGene00014261 locus:shk-1 potassium channel protein status:Confirmed UniProt:Q09658 protein_id:CAA88477.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE32769 WBGene00014261 locus:shk-1 potassium channel protein status:Confirmed UniProt:Q8I4B0 protein_id:CAA88477.2 [c_elegans-WS236-ecoli-05Mar2013-contam.fasta]
  • CE32769 WBGene00014261 locus:shk-1 status:Confirmed UniProt:Q8I4B0 protein_id:CAA88477.2 Potassium voltage-gated channel protein shk-1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q8I4B0, Isoform a of Potassium voltage-gated channel protein shk-1 OS=Caenorhabditis elegans GN=shk-1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 481 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    ion channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFGGQRRCI ESSDDNDSID SMSIQQKNKE KEEWKWAQSL ASRAAEMASG NSEEGKGMLL  60
   61 RNGDDRIRLP SPQRGTPDTS STQGHPYTDQ IVTINVSGMR FQTFESTLSR YPNSLLGDRN 120
  121 KRQHFFVSDT NEFFFDRHRT TFESILYIYQ SGGRVKRPEI VPIDIFLKEM RFFQMGDDLL 180
  181 EEFWIAEGYE KPKEVMMPNN KTQRKIWELM EYPDSSLSAR IIAFISIAVI ALSIISFCWE 240
  241 TVPSDIEEKP INNSATAELL DEMDEKHYSP FFWIELMCIL WFTIELILRF ISCPCKVTFA 300
  301 TSVLNIIDFV AIAPFFVNFF FADTSKSNSS MSFAVLRVLR LVRVFRVFKL SRHSVGLQIL 360
  361 GKTFRSSVQE FCLLIFFMAI ALVLFASGMY FAEQGEPNSK FTSIPASFWF VLVTMTTVGY 420
  421 GDLVPLSPFG KVVGGMCAMI GVLTLALPVP IIVANFKHFY RQENRLASMK SKGDDADDDI 480
  481 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..481] PSI-BLAST 83.0 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle