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Protein Overview: acdh-13

General Information:
Name(s) found: acdh-13 / CE32595 [WormBase]
Description(s) found:
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  • WBGene00001566 locus:acdh-13 status:Partially_confirmed UniProt:Q8I7L9 protein_id:CCD64012.1 [WormBase]
  • gi|32565760|ref|NP_872080.1| Acyl CoA DeHydrogenase family member (acdh-13) [Caenorhabditis elegans] [NCBI NR]
  • gi|26251648|gb|AAN84857.1| Gex interacting protein protein 9, isoform b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32595 WBGene00001566 locus:gei-9 status:Partially_confirmed TR:Q8I7L9 protein_id:AAN84857.1 [wormpep150.fasta]
  • 32595 WBGene00001566 locus:gei-9 status:Partially_confirmed TR:Q8I7L9 protein_id:AAN84857.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein, with a coiled coil-4 domain, of bilaterial origin, GEX (Gut on EXterior) Interacting protein GEI-9 (gei-9) [Caenorhabditis elegans]gi|26251648|gb|AAN84857.1| Gex interacting protein protein 9, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:gei-9 status:Partially_confirmed TR:Q8I7L9 protein_id:AAN84857.1 [wormpep115.fasta.reversed]
  • CE32595 WBGene00001566 locus:acdh-13 status:Partially_confirmed UniProt:Q8I7L9_CAEEL protein_id:AAN84857.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32595 WBGene00001566 locus:gei-9 status:Partially_confirmed UniProt:Q8I7L9_CAEEL protein_id:AAN84857.1| [wormORF-contam.fasta]
  • GEX Interacting protein family member (gei-9) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Gex interacting protein protein 9, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32595 WBGene00001566 locus:acdh-13 status:Partially_confirmed UniProt:Q8I7L9 protein_id:AAN84857.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32595 WBGene00001566 locus:acdh-13 status:Partially_confirmed UniProt:Q8I7L9 protein_id:CCD64012.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 313 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    proteolysis [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    Molecular Function: acyl-CoA dehydrogenase activity [IEALink to PubMed article]
    subtilase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFAAATIGM ARRALRELSI WCNRTPSRQN DRTTLADDSR SQRIVTELAL KVYALESSLY  60
   61 YLSGLIDEGL SVVVDIENSL LSIMTRDVLQ AVISAQLELV GVAASDASFP HEKLFRDVTT 120
  121 LLSIIDEGAD VEQIGLATIA TWATSTSHKR VVSTLKRWLK NEKEADELRN PGLSHYIAEH 180
  181 AHPSLQLACQ ELEFSMSRIN NVVSKLLTSQ GKNIEQDYGS LEALVNVLKN NLVMVSTISR 240
  241 ASRSYSIGLR NADIELAWAT IICSRLSRAT WFELDSLSDL FGLVRFNPSL LNAGRAVFDL 300
  301 GGYIIESPLE KNW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..313] PSI-BLAST 58.522879 No description for 2uxwA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle