YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE32461

General Information:
Name(s) found: CE32461 [WormBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • WBGene00010496 locus:sec-12 status:Partially_confirmed UniProt:Q21115 protein_id:CAB00033.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIFGGGQSK KAPLIGESGI PAYCLKTIGS RHILVAGGGG ASKTGVLNEI QTHLFTTGSA  60
   61 NQDVGFQSKC VGKFDTGSMA TMNMDVACAF DEISAKYVIA AGQENLCALY MTRAFKLNEE 120
  121 NECLSFEIQK VSQVRSDFHA SNSYQKCVRF DKSSRGKIFA TGGADGHIRI WNAQIVFRAE 180
  181 NEDAQPILTI QAHKADVDDI DFSKDSKTII SVGAEGAFIW STQTGARLLD LQFPIEISRG 240
  241 FKMRSIRCTP LGKASNNTVF VAAYNSISKG SKDQASFLSL WAFNSERNVA RPVVTKLLAK 300
  301 GQSISSLAVS DCGNFTAVGT MSGSVLVFDT HECRRLYFSP ESHGLFVTGI EFVSRTSPSI 360
  361 CEDIQSETPG IASGFQSAVV TLAADKTMQL HRVPYPQPQP FSEYLLIISL VCLIFTWLSS 420
  421 FFIVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..425] PSI-BLAST 64.69897 PAF-AH Holoenzyme: Lis1/Alfa2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.5243404577251 bayes_pls_golite062009
  • protein binding
    		•  0.963225630679788 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.93242165848807 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.839036223100663 bayes_pls_golite062009
  • DNA binding
    		•  0.259162767742938 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle