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Protein Overview: CE32380

General Information:
Name(s) found: CE32380 [WormBase]
Description(s) found:
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  • WBGene00008819 locus:shw-1 status:Confirmed UniProt:Q8I4L2 protein_id:CAD56574.1 [WormBase]
  • gi|32564088|ref|NP_871941.1| hypothetical protein F14F11.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|25004930|emb|CAD56574.1| C. elegans protein F14F11.1f, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32380 WBGene00008819 status:Partially_confirmed TR:Q8I4L2 protein_id:CAD56574.1 [wormpep150.fasta]
  • 32380 WBGene00008819 status:Partially_confirmed TR:Q8I4L2 protein_id:CAD56574.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • k+ channel tetramerisation and ion transport protein family member (57.9 kD) (2I598) [Caenorhabditis elegans]gi|25004930|emb|CAD56574.1| Hypothetical protein F14F11.1f [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q8I4L2 protein_id:CAD56574.1 [wormpep115.fasta.reversed]
  • CE32380 WBGene00008819 status:Partially_confirmed UniProt:Q8I4L2_CAEEL protein_id:CAD56574.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32380 WBGene00008819 status:Partially_confirmed UniProt:Q8I4L2_CAEEL protein_id:CAD56574.1| [wormORF-contam.fasta]
  • Hypothetical protein F14F11.1f [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F14F11.1f [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32380 WBGene00008819 status:Partially_confirmed UniProt:Q8I4L2 protein_id:CAD56574.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32380 WBGene00008819 locus:shw-1 status:Confirmed UniProt:Q8I4L2 protein_id:CAD56574.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of G5EC00, SHaW family of potassium channels OS=Caenorhabditis elegans GN=shw-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    ion channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGDIHPKKV LLKTKSWMDT EHRVILNVGG IRHETYSHVL KKIPATRLSR LTPNLANYDP  60
   61 VLNEYFFDRH PGVFSMILNY YRTGKLHYPT NVCGPLFEEE LEFWGLDANQ VEPCCWMTYT 120
  121 QHRDTQDTLA VIESLDLDGD PPTQEEIAKK FGWEDDYYTG NMSQWQRLKP RVWALFDEPW 180
  181 SSKYARVISS LSVAFILAST CSFILKTDPS FQIPDIDVFY SLRVVDEGGF KNYHKTIGTD 240
  241 KPVTSPHPNF FYVDLICNIW FTIELLIRSL FCPSFHKFVR SPLTIIDVIS TGAFFFESLL 300
  301 HAILIQTGSL VTLDFLSMIC VLRLFKLTQH FSGLKILIQT FKASAQELFL LVFFVILAIV 360
  361 IFAALVYYAE RSQLNKDNQF TSIPLGLWWS LVTISTVGFG DMVPKTYLGM LVGSLCALMG 420
  421 VLTIALPVPV IVSNFSNLYS HSQARAKLPK KRRRVLQAHE VKPALLGVKQ HHGKHRKKSS 480
  481 SATFNQPPAN FKNANGGPSM HDNSASKLMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..510] PSI-BLAST 82.69897 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle