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Protein Overview: crh-1

General Information:
Name(s) found: crh-1 / CE32250 [WormBase]
Description(s) found:
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  • WBGene00000793 locus:crh-1 status:Confirmed UniProt:Q9U2I0 protein_id:CAB54382.2 [WormBase]
  • gi|71993717|ref|NP_001022860.1| CREB Homolog family member (crh-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|24817590|emb|CAB54382.2| C. elegans protein Y41C4A.4b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein Y41C4A.4b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE32250 WBGene00000793 locus:crh-1 status:Confirmed TR:Q9U2I0 protein_id:CAB54382.2 [wormpep150.fasta]
  • 32250 WBGene00000793 locus:crh-1 status:Predicted TR:Q9U2I0 protein_id:CAB54382.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE32250 WBGene00000793 locus:crh-1 status:Predicted TR:Q9U2I0 protein_id:CAB54382.2 [wormpep132.fasta]
  • 32250 WBGene00000793 locus:crh-1 status:Confirmed TR:Q9U2I0 protein_id:CAB54382.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q9U2I0 protein_id:CAB54382.2 [wormpep115.fasta.reversed]
  • CE32250 WBGene00000793 locus:crh-1 status:Confirmed UniProt:Q9U2I0_CAEEL protein_id:CAB54382.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32250 WBGene00000793 locus:crh-1 status:Confirmed UniProt:Q9U2I0_CAEEL protein_id:CAB54382.2| [wormORF-contam.fasta]
  • CREB Homolog family member (crh-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32250 WBGene00000793 locus:crh-1 status:Confirmed UniProt:Q9U2I0 protein_id:CAB54382.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Isoform of D0Z5N1, CREB Homolog OS=Caenorhabditis elegans GN=crh-1 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 327 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][IEALink to PubMed article]
    Biological Process: dauer larval development [IGI]
    transforming growth factor beta receptor signaling pathway [IGI]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    intracellular protein kinase cascade [IDALink to PubMed article]
    regulation of transcription [IDALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]
    transcription regulator activity [IDALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATMASTSNC SPVATSPLMM LLFKALQEGG DSEDEARRRR EQLNRRPSYR MILKDLETAD  60
   61 KVMKKEPEET PPSSVDASPL QFQSVMRPPP TAPPTSAATP NRILPSSNAA SPYGSPLGSS 120
  121 ILSNQPLVLP FAPINGDFDF SAAIAAASQP KVFPGGPQQN GLGGGGGGGG VPGPSSGIAG 180
  181 MSVQPPTSST PSQQQSVQSL EGTSGLIGSA MKPMLGIDAV SFPEFGTTDW QSPMLSGGYS 240
  241 SSPSPTMTGG SMRMGGGPLH GEDESNRKRQ VRLLKNREAA KECRRKKKEY VKCLENRVSV 300
  301 LENQNKALIE ELKTLKELYC RKEKDGM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] MSA 2.267995 View MSA. No confident structure predictions are available.
    2 View Details [180..241] deduced N/A No confident structure predictions are available.
    3 View Details [242..327] PSI-BLAST 11.69897 Transcription factor Creb


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle