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Protein Overview: pde-4

General Information:
Name(s) found: pde-4 / CE32060 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00020114 locus:pde-4 Probable 3',5'-cyclic phosphodiesterase pde-4 status:Confirmed UniProt:Q22000 protein_id:CCD69649.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 599 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [IEALink to PubMed article]
    Molecular Function: catalytic activity [IEALink to PubMed article]
    3',5'-cyclic-nucleotide phosphodiesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRRHTVWF VPGSRSAGSA TAADGLGGAH LTPSLSSSVH ARRESFLYRA SDDLREASSL  60
   61 RPVSRASSIA SNEHGHGDDL IVTPFAQLLA SLRNVRSNLI SITNIQNSDD SRHANRSAKR 120
  121 PPLHNIELPD DVVHCAHDTL EELDWCLDQL ETIQTHRSVS EMASSKFRKM LNKELSHFAE 180
  181 SSKSGTQVSK FLITTYMDKE EDEPSIEIEV PTEVQGPSTS GPMTLSILKK AQTAAMNKIS 240
  241 GVRKLRAPSH DGHVPEYGVN CAREIAVHMQ RLDDWGPDVF KIDELSKNHS LTVVTFSLLR 300
  301 QRNLFKTFEI HQSTLVTYLL NLEHHYRNNH YHNFIHAADV AQSMHVLLMS PVLTEVFTDL 360
  361 EVLAAIFAGA VHDVDHPGFT NQYLINSNNE LAIMYNDESV LEQHHLAVAF KLLQDSNCDF 420
  421 LANLSRKQRL QFRKIVIDMV LATDMSKHMS LLADLKTMVE AKKVAGNNVI VLDKYNDKIQ 480
  481 VLQSMIHLAD LSNPTKPIEL YQQWNQRIME EYWRQGDKEK ELGLEISPMC DRGNVTIEKS 540
  541 QVGFIDYIVH PLYETWADLV YPDAQNILDQ LEENREWYQS RIPEEPDTAR TVTEDDEHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] MSA 5.057978 View MSA. No confident structure predictions are available.
    2 View Details [127..250] MSA 2.123991 View MSA. No confident structure predictions are available.
    3 View Details [251..599] PSI-BLAST 122.0 Catalytic domain of cyclic nucleotide phosphodiesterase pde4d


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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