| Protein: | pde-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 599 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pde-4.
| Description | E-value | Query Range |
Subject Range |
|
|
647.0 | [0..9] | [596..68] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MTSRRHTVWF VPGSRSAGSA TAADGLGGAH LTPSLSSSVH ARRESFLYRA SDDLREASSL 60
61 RPVSRASSIA SNEHGHGDDL IVTPFAQLLA SLRNVRSNLI SITNIQNSDD SRHANRSAKR 120
121 PPLHNI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [127-250] |
1 11 21 31 41 51
| | | | | |
1 ELPDDVVHCA HDTLEELDWC LDQLETIQTH RSVSEMASSK FRKMLNKELS HFAESSKSGT 60
61 QVSKFLITTY MDKEEDEPSI EIEVPTEVQG PSTSGPMTLS ILKKAQTAAM NKISGVRKLR 120
121 APSH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [251-599] |
1 11 21 31 41 51
| | | | | |
1 DGHVPEYGVN CAREIAVHMQ RLDDWGPDVF KIDELSKNHS LTVVTFSLLR QRNLFKTFEI 60
61 HQSTLVTYLL NLEHHYRNNH YHNFIHAADV AQSMHVLLMS PVLTEVFTDL EVLAAIFAGA 120
121 VHDVDHPGFT NQYLINSNNE LAIMYNDESV LEQHHLAVAF KLLQDSNCDF LANLSRKQRL 180
181 QFRKIVIDMV LATDMSKHMS LLADLKTMVE AKKVAGNNVI VLDKYNDKIQ VLQSMIHLAD 240
241 LSNPTKPIEL YQQWNQRIME EYWRQGDKEK ELGLEISPMC DRGNVTIEKS QVGFIDYIVH 300
301 PLYETWADLV YPDAQNILDQ LEENREWYQS RIPEEPDTAR TVTEDDEHK
|
| Detection Method: | |
| Confidence: | 122.0 |
| Match: | 1oynA |
| Description: | Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |
Matching Structure (courtesy of the PDB): |
|
