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Protein Overview: CE32054

General Information:
Name(s) found: CE32054 [WormBase]
Description(s) found:
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  • WBGene00019219 status:Partially_confirmed UniProt:Q9N5M1 protein_id:CCD61679.1 [WormBase]
  • gi|32564750|ref|NP_494765.2| H20J04.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|24418257|gb|AAF39890.2| Hypothetical protein H20J04.4a [Caenorhabditis elegans] [NCBI NR]
  • gi|115532546|ref|NP_001040788.1| hypothetical protein H20J04.4 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32054 WBGene00019219 helicase status:Partially_confirmed TR:Q9N5M1 protein_id:AAF39890.2 [wormpep150.fasta]
  • 32054 WBGene00019219 helicase status:Partially_confirmed TR:Q9N5M1 protein_id:AAF39890.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • DEAD/DEAH box helicase and helicase, C-terminal (2E623) [Caenorhabditis elegans]gi|24418257|gb|AAF39890.2| Hypothetical protein H20J04.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • helicase status:Partially_confirmed TR:Q9N5M1 protein_id:AAF39890.2 [wormpep115.fasta.reversed]
  • CE32054 WBGene00019219 helicase status:Partially_confirmed UniProt:Q9N5M1_CAEEL protein_id:AAF39890.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32054 WBGene00019219 helicase status:Partially_confirmed UniProt:Q9N5M1_CAEEL protein_id:AAF39890.2| [wormORF-contam.fasta]
  • Hypothetical protein H20J04.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • H20J04.4a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32054 WBGene00019219 helicase status:Partially_confirmed UniProt:Q9N5M1 protein_id:AAF39890.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32054 WBGene00019219 helicase status:Partially_confirmed UniProt:Q9N5M1 protein_id:CCD61679.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE32054 WBGene00019219 status:Partially_confirmed UniProt:Q9N5M1 protein_id:CCD61679.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q2WF63, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_H20J04.4 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: morphogenesis of an epithelium [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATP-dependent helicase activity [IEALink to PubMed article]
    helicase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVCDAILS DDDDDLEMDE EQEKPSTSSK SVKNEEFEEF EDGEDVEDEE DEASDEDEEE  60
   61 SEGEEGDEFK SSDDTPKPIQ ISEDNMTTKK FSQLGVCSWI TQQLQTMQIK TATPVQAACI 120
  121 PKILEGSDIL GCARTGTGKT LAFAIPILQK LSVDPYGIYA LILTPTRELA FQIAEQFTAL 180
  181 GKPITLKCSV IVGGRSLIHQ ARELSERPHV VVATPGRLAD LIESDPDTIA KVFKKIQFFV 240
  241 LDEADRMLEG QYNDQLKPIF ESISEKRQTL LLSATITNNI NMLHRVSTRK PYFFEDKGKD 300
  301 DESTVDRLEQ KYVVCPVAVK DAYLVYVVKN YSEKNPKSSV MIFAQTCREC QALAYMFEGL 360
  361 GFRVGSLHSQ IPQKQRLAAL SAFRSKTLQV IICTDVASRG LDIPHVDLVV NHNVPQCPKT 420
  421 YIHRVGRSAR AGRFGSALSF VTQYDVELLQ AVEQVIGKKL DELKVKIQTF RKNIWKTQKS 480
  481 TRIFNFCF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 87.0 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle