YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE32054
Organism: Caenorhabditis elegans
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32054.

Description E-value Query
Range
Subject
Range
DBP2_SCHPO - ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dbp2 PE=2 ...
dbp2 - ATP-dependent RNA helicase Dbp2
367.0 [0..18] [471..60]

Back

Predicted Domain #1
Region A:
Residues: [1-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVCDAILS DDDDDLEMDE EQEKPSTSSK SVKNEEFEEF EDGEDVEDEE DEASDEDEEE  60
   61 SEGEEGDEFK SSDDTPKPIQ ISEDNMTTKK FSQLGVCSWI TQQLQTMQIK TATPVQAACI 120
  121 PKILEGSDIL GCARTGTGKT LAFAIPILQK LSVDPYGIYA LILTPTRELA FQIAEQFTAL 180
  181 GKPITLKCSV IVGGRSLIHQ ARELSERPHV VVATPGRLAD LIESDPDTIA KVFKKIQFFV 240
  241 LDEADRMLEG QYNDQLKPIF ESISEKRQTL LLSATITNNI NMLHRVSTRK PYFFEDKGKD 300
  301 DESTVDRLEQ KYVVCPVAVK DAYLVYVVKN YSEKNPKSSV MIFAQTCREC QALAYMFEGL 360
  361 GFRVGSLHSQ IPQKQRLAAL SAFRSKTLQV IICTDVASRG LDIPHVDLVV NHNVPQCPKT 420
  421 YIHRVGRSAR AGRFGSALSF VTQYDVELLQ AVEQVIGKKL DELKVKIQTF RKNIWKTQKS 480
  481 TRIFNFCF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.0
Match: 2db3A
Description: No description for 2db3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle