Protein Overview: taf-12

General Information:
Name(s) found:	taf-12 / CE31842 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00006396 locus:taf-12 status:Confirmed UniProt:Q9U226 protein_id:CAB60514.2 [WormBase] gi\|32564472\|ref\|NP_499538.2\| TAF (TBP-associated transcription factor) family member (taf-12) [Caenorhabditis elegans] [NCBI NR] gi\|22859115\|emb\|CAB60514.2\| C. elegans protein Y56A3A.4a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] [wormpep88.fasta] CE31842 WBGene00006396 locus:taf-12 status:Confirmed TR:Q9U226 protein_id:CAB60514.2 [wormpep150.fasta] 31842 WBGene00006396 locus:taf-12 status:Confirmed TR:Q9U226 protein_id:CAB60514.2 [wormpep130-phg-ecoli-orf-rand.fasta] TBP-Associated transcription Factor family member (38.2 kD) (taf-12) [Caenorhabditis elegans]gi\|22859115\|emb\|CAB60514.2\| Hypothetical protein Y56A3A.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] locus:taf-12 status:Confirmed TR:Q9U226 protein_id:CAB60514.2 [wormpep115.fasta.reversed] CE31842 WBGene00006396 locus:taf-12 status:Confirmed UniProt:Q9U226_CAEEL protein_id:CAB60514.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE31842 WBGene00006396 locus:taf-12 status:Confirmed UniProt:Q9U226_CAEEL protein_id:CAB60514.2\| [wormORF-contam.fasta] Hypothetical protein Y56A3A.4 [Caenorhabditis elegans] [nr-271106-contam.fasta] TAF (TBP-associated transcription factor) family member (taf-12) [Caenorhabditis elegans] [nr-271106-contam.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE31842 WBGene00006396 locus:taf-12 status:Confirmed UniProt:Q9U226 protein_id:CAB60514.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] TAF (TBP-associated transcription factor) family OS=Caenorhabditis elegans GN=taf-12 PE=1 SV=2 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	342 amino acids
Gene Ontology:
Cellular Component:	transcription factor TFIID complex [IEA]
Biological Process:	embryonic development ending in birth or egg hatching [IMP ] transcription initiation [IEA]
Molecular Function:	transcription initiation factor activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMEEFSPPT SPNNHVIVQA NPQIAAALST NSPMQQGIPP QGHQNPNEQQ QQQQFVGQPP  60
   61 MGGMGGPMRM QMPQQQIRQM PYPSPQMRAG PPPPQQQQQQ HFQQMGIPQQ QQPQQFTPNG 120
  121 QSMQMQQRPM QMGMAQGPGP SGHLMGMVGG PPPQHMMQQQ GGGGPPQFVP NSSPMPLPPQ 180
  181 QIMQVQHQQQ HQQPPPSQQI QQPPIPQPQQ QQAPPPQMIP AAVPYGSIME KSKLDDLMQQ 240
  241 ISSTTVLEEN VKDVLVEYAD DFVSSLIDKA CKMIKNREVK KIESRDIEFI LKNVYNMPVV 300
  301 PRAASHNFGS QTEVIDLSKE KFVPTEAHKQ RVALLKKQIK KL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..155]	PSI-BLAST	7.221849	Sec24
2	View Details	[156..234]	deduced	N/A	No confident structure predictions are available.
3	View Details	[235..342]	PSI-BLAST	26.69897	TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.96

Protein Overview: taf-12

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: