| Protein: | taf-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 342 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf-12.
| Description | E-value | Query Range |
Subject Range |
|
|
167.0 | [0..226] | [341..57] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MKMEEFSPPT SPNNHVIVQA NPQIAAALST NSPMQQGIPP QGHQNPNEQQ QQQQFVGQPP 60
61 MGGMGGPMRM QMPQQQIRQM PYPSPQMRAG PPPPQQQQQQ HFQQMGIPQQ QQPQQFTPNG 120
121 QSMQMQQRPM QMGMAQGPGP SGHLMGMVGG PPPQH
|
| Detection Method: |  |
| Confidence: | 7.221849 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [156-234] |
1 11 21 31 41 51
| | | | | |
1 MMQQQGGGGP PQFVPNSSPM PLPPQQIMQV QHQQQHQQPP PSQQIQQPPI PQPQQQQAPP 60
61 PQMIPAAVPY GSIMEKSKL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [235-342] |
1 11 21 31 41 51
| | | | | |
1 DDLMQQISST TVLEENVKDV LVEYADDFVS SLIDKACKMI KNREVKKIES RDIEFILKNV 60
61 YNMPVVPRAA SHNFGSQTEV IDLSKEKFVP TEAHKQRVAL LKKQIKKL
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1h3oB |
| Description: | TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.581886805340955 | bayes_pls_golite062009 |
