YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: taf-12

General Information:
Name(s) found: taf-12 / CE31842 [WormBase]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • WBGene00006396 locus:taf-12 status:Confirmed UniProt:Q9U226 protein_id:CAB60514.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: transcription factor TFIID complex [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    transcription initiation [IEALink to PubMed article]
    Molecular Function: transcription initiation factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMEEFSPPT SPNNHVIVQA NPQIAAALST NSPMQQGIPP QGHQNPNEQQ QQQQFVGQPP  60
   61 MGGMGGPMRM QMPQQQIRQM PYPSPQMRAG PPPPQQQQQQ HFQQMGIPQQ QQPQQFTPNG 120
  121 QSMQMQQRPM QMGMAQGPGP SGHLMGMVGG PPPQHMMQQQ GGGGPPQFVP NSSPMPLPPQ 180
  181 QIMQVQHQQQ HQQPPPSQQI QQPPIPQPQQ QQAPPPQMIP AAVPYGSIME KSKLDDLMQQ 240
  241 ISSTTVLEEN VKDVLVEYAD DFVSSLIDKA CKMIKNREVK KIESRDIEFI LKNVYNMPVV 300
  301 PRAASHNFGS QTEVIDLSKE KFVPTEAHKQ RVALLKKQIK KL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 7.221849 Sec24
    2 View Details [156..234] deduced N/A No confident structure predictions are available.
    3 View Details [235..342] PSI-BLAST 26.69897 TAF(II)-20, (TAF(II)-15, hTAF12), histone fold domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.581886805340955 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle