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Protein Overview: CE31856

General Information:
Name(s) found: CE31856 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00012356 status:Partially_confirmed UniProt:Q8I104 protein_id:CAD54160.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 714 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: electron transport [IEALink to PubMed article]
    teichoic acid biosynthetic process [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    menaquinone biosynthetic process [IEALink to PubMed article]
    Molecular Function: D-alanine-poly(phosphoribitol) ligase activity [IEALink to PubMed article]
    AMP binding [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    phosphopantetheine binding [IEALink to PubMed article]
    o-succinylbenzoate-CoA ligase activity [IEALink to PubMed article]
    ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEINRNLKI IDVGCNATIP AEDIFEKIDN FTEILRNSNC RAITGSDVVF ISIERGLDAI  60
   61 VAVIACLRLE LVFTFCPPAS DTDDVVRKFR TTLVFNGKHV SRIAQNDENG LLAAESICYV 120
  121 IQTSGTTGAK KQVAVPVDCI RKNIEHFCSL FNLTSSDSIL FSTSLHFDPS IVELFMAFHV 180
  181 GCTLIITPDE YRSEPHKLQK SIDKFQPTVV QLTPTVFEML PSADSLLSAT SSLRILLLGG 240
  241 SHFPISSINS CRSPENKTRV FNVYGVTEVS CWASYFEVEH GCSEVLIGEA IYGTQLGVDS 300
  301 DGQLILGGPR QCYVDGVKAL NHKTGDRVEV TENGGQKIVG RIDRLIKHRG IRICLDHLSH 360
  361 VALRHDPSIQ SLHTMLLDNR NIVQFHVGPG SSSPTHKTLR LDATTVVPIT VIQVAELPIN 420
  421 SSGKVDEKAL ERIYGKVSGG GNSKFQEIFE QKLKVKLSEV LDVSFVSLGV NSLLAAELST 480
  481 FFQVSQQTEV MRRMLNETVP VGDVLRKFEL SPKLQSHVDF EVRKIIRKRQ PKMRWAVDLR 540
  541 KCIDGNLLVI CNTLVVCASH AGIVIAVNPQ TGNLIWRAEC GVRFECKPIL VNDQVVLGCK 600
  601 STGLYFICVK TGQIQNSVIL ETVGVRAQCA FDGGAIYCTT ENGNFHVIDP KTYGSIYSHA 660
  661 ISKIPGGTSV GPVIAPDGSI FATITAGAVL RTTVPRKSII HGIRRRHPFW TNFR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..437] PSI-BLAST 96.30103 Phenylalanine activating domain of gramicidin synthetase 1
    2 View Details [438..517] PSI-BLAST 13.69897 No description for 2gdwA was found.
    3 View Details [518..714] PSI-BLAST 6.045757 VibH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.30539319136328 bayes_pls_golite062009
  • ligase activity
    		•  0.20580854487081 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  0.0874529293560995 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.985567717478902 bayes_pls_golite062009
  • transferase activity
    		•  0.65532722795675 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.590907147191141 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  0.589573845516701 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.58932324215015 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle