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Protein Overview: CE31247

General Information:
Name(s) found: CE31247 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00020765 status:Partially_confirmed UniProt:Q22721 protein_id:CCD71506.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 651 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    D-ribose metabolic process [IEALink to PubMed article]
    Molecular Function: thiamin pyrophosphate binding [IEALink to PubMed article]
    nucleotidyltransferase activity [IEALink to PubMed article]
    ribokinase activity [IEALink to PubMed article]
    phosphotransferase activity, alcohol group as acceptor [IEALink to PubMed article]
    carbon-carbon lyase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSRFFGQKR SFSKFLQISP QVKEALASGE GVVALESTVI THGLPYPHNL STARSLEQKV  60
   61 RSSGSHPATI ALFDGKIHVG LDDEKLELLA SSQNAVKVSS RDIAKTLIKK EVGGTTVAST 120
  121 MKIAHAAGIS VFATGGIGGV HRGADQTFDV SADLQELSQT PVCVVCSGVK SILDIPKTVE 180
  181 YLETHSVNCI VYGQENVFPS FFTRTSDRKA QFCTESLEEV VHLLKTSKSL GLPYGTILAC 240
  241 PIPEKYAADG DAIQKAIDQA VQEAIEQNIA SQSVTPFILA RVNELTQGAS MATNIALLEN 300
  301 NASIAGRLAA KLCDRRPLTI SQSQPTASTT RKPKVVSIGA TIVDFEAITS EDVKDDGGSY 360
  361 NGQVVQRMGG VARNHADALA RLGCDSVFIS AIGDDNNGHF FRQNSHKIDI NRVKIISNKP 420
  421 TCTYLAVNVK GNVKYGIVTC EPLLSVITPS LVESNEDALE SSDFILLDSN LSVPVMARVL 480
  481 EIAKKHDKQV WLEPTDIDKV KKVFDTGLVG AVTAASPNAN EFLKWAKLCH VSVDPSVIDT 540
  541 ADGVLELIEK EKTKLLLNTS IFIVTLANKG SAVVYRNKLG QLEFQSLPPP LQMNKVVSVS 600
  601 GAGDSFNSGV IAGLAHNKTV VESLQIGQEC ARLTLQTSLA ISDAITPNLL A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 76.69897 Crystal structure of conserved hypothetical protein possibly involved in carbohydrate metabolism (TM1464) from Thermotoga maritima at 1.90 A resolution
    2 View Details [323..651] PSI-BLAST 53.0 Crystal structure of Ribokinase (TM0960) from Thermotoga maritima at 2.15 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.323381943081617 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.74474587246986 bayes_pls_golite062009
  • kinase activity
    		•  1.70621208079687 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.6785952092561 bayes_pls_golite062009
  • transferase activity
    		•  1.38207816260569 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.11089536716206 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  0.0801266236611598 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle