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View Structure Prediction Details

Protein: CE31247
Organism: Caenorhabditis elegans
Length: 651 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31247.

Description E-value Query
Range
Subject
Range
gi|92098315, gi|... - gi|94536980|ref|NP_001035392.1| hypothetical protein LOC678543 [Danio rerio], gi|92098315|gb|AAI1529...
599.0 [0..14] [650..25]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSRFFGQKR SFSKFLQISP QVKEALASGE GVVALESTVI THGLPYPHNL STARSLEQKV  60
   61 RSSGSHPATI ALFDGKIHVG LDDEKLELLA SSQNAVKVSS RDIAKTLIKK EVGGTTVAST 120
  121 MKIAHAAGIS VFATGGIGGV HRGADQTFDV SADLQELSQT PVCVVCSGVK SILDIPKTVE 180
  181 YLETHSVNCI VYGQENVFPS FFTRTSDRKA QFCTESLEEV VHLLKTSKSL GLPYGTILAC 240
  241 PIPEKYAADG DAIQKAIDQA VQEAIEQNIA SQSVTPFILA RVNELTQGAS MATNIALLEN 300
  301 NASIAGRLAA KLCDRRPLTI SQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.69897
Match: 1vkmA
Description: Crystal structure of conserved hypothetical protein possibly involved in carbohydrate metabolism (TM1464) from Thermotoga maritima at 1.90 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.323381943081617 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [323-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQPTASTTRK PKVVSIGATI VDFEAITSED VKDDGGSYNG QVVQRMGGVA RNHADALARL  60
   61 GCDSVFISAI GDDNNGHFFR QNSHKIDINR VKIISNKPTC TYLAVNVKGN VKYGIVTCEP 120
  121 LLSVITPSLV ESNEDALESS DFILLDSNLS VPVMARVLEI AKKHDKQVWL EPTDIDKVKK 180
  181 VFDTGLVGAV TAASPNANEF LKWAKLCHVS VDPSVIDTAD GVLELIEKEK TKLLLNTSIF 240
  241 IVTLANKGSA VVYRNKLGQL EFQSLPPPLQ MNKVVSVSGA GDSFNSGVIA GLAHNKTVVE 300
  301 SLQIGQECAR LTLQTSLAIS DAITPNLLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.0
Match: 1vm7A
Description: Crystal structure of Ribokinase (TM0960) from Thermotoga maritima at 2.15 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.74474587246986 bayes_pls_golite062009
kinase activity 1.70621208079687 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.6785952092561 bayes_pls_golite062009
transferase activity 1.38207816260569 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.11089536716206 bayes_pls_golite062009
carbohydrate kinase activity 0.0801266236611598 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle