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Protein Overview: CE31008

General Information:
Name(s) found: CE31008 [WormBase]
Description(s) found:
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  • WBGene00018991 status:Partially_confirmed UniProt:Q8MXF1 protein_id:CCD72013.1 [WormBase]
  • gi|25144281|ref|NP_741098.1| hypothetical protein F56F11.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|21328360|gb|AAM48537.1|AF099922_5 Hypothetical protein F56F11.4b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31008 WBGene00018991 status:Partially_confirmed TR:Q8MXF1 protein_id:AAM48537.1 [wormpep150.fasta]
  • 31008 WBGene00018991 status:Partially_confirmed TR:Q8MXF1 protein_id:AAM48537.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • 26s protease regulatory (48.0 kD) (3D953) [Caenorhabditis elegans]gi|21328360|gb|AAM48537.1| Hypothetical protein F56F11.4b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q8MXF1 protein_id:AAM48537.1 [wormpep115.fasta.reversed]
  • CE31008 WBGene00018991 status:Partially_confirmed UniProt:Q8MXF1_CAEEL protein_id:AAM48537.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31008 WBGene00018991 status:Partially_confirmed UniProt:Q8MXF1_CAEEL protein_id:AAM48537.1| [wormORF-contam.fasta]
  • Hypothetical protein F56F11.4b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F56F11.4b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31008 WBGene00018991 status:Partially_confirmed UniProt:Q8MXF1 protein_id:AAM48537.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31008 WBGene00018991 status:Partially_confirmed UniProt:Q8MXF1 protein_id:CCD72013.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F56F11.4 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: DNA repair [IEALink to PubMed article]
    protein catabolic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    DNA-dependent ATPase activity [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    damaged DNA binding [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEILVVGS ILPSDKFFCF LMGPAPVFPN SRKPATLDAN SDEQTLRPYF KTKVEQAEQT  60
   61 VAEKSINVRR LMAQQKELNG KVRLLKEEIS HLHEQGSHVG EVCKAMDKKK VLVKNHPDGK 120
  121 YIVDVAASVD ISTLAAGTRV ALRADNYAIH EVLPSKVDPL VSLMMVEKVP DSTYEMVGGL 180
  181 DTQIKEIKEV IELPVKHPEL FDALGIAQPK GVLLYGPPGT GKTLLARAVA HHTECTFIRV 240
  241 SGSELVQKFI GEGARMVREL FVMAREHAPS IIFMDEIDSI GSSRVEGSRG GDSEVQRTML 300
  301 ELLNQLDGFE ATKNIKVIMA TNRIDILDSA LLRPGRIDRK IEFPAPDEKA RAQILKIHSR 360
  361 KMNLMRGIRM DKIAEQIPGA SGAEVKSVCT EAGMFALRER RIHVTQEDFE MAVGKVMQKD 420
  421 SEKNMSIKKL WK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..432] PSI-BLAST 88.522879 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle