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Protein Overview: taf-11.3

General Information:
Name(s) found: taf-11.3 / CE31808 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00006395 locus:taf-11.3 status:Confirmed UniProt:Q20361 protein_id:CAA84701.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    transcription factor TFIID complex [ISSLink to PubMed article]
    Biological Process: positive regulation of growth rate [IMPLink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [ISSLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    Molecular Function: protein binding [ISSLink to PubMed article]
    transcription coactivator activity [ISSLink to PubMed article]
    RNA polymerase II transcription factor activity [IEALink to PubMed article]
    specific RNA polymerase II transcription factor activity [ISSLink to PubMed article]
    TATA-binding protein binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEEDEIAE LSKDTPPEKK RKISESGASS SSFIPESTSE ESLSLKSKKS GSRKRILTAS  60
   61 SSTNSIAMKS SASWIQEKDT PINKSDEEKS IAESLLIANF SNEQLDRYTA FKRSRFNRRI 120
  121 IKNVITRTTG QIPSDPLALA VAGLTKMFIG DLVEEAVELR GALNEQDRPV QPYHITRAFD 180
  181 KLLAEGKLWP PYGAKY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..196] PSI-BLAST 38.09691 TAF(II)28

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.73700145395396 bayes_pls_golite062009
  • DNA binding
    		•  1.04127970884713 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.86554830065808 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.57702121108343 bayes_pls_golite062009
  • protein binding
    		•  0.260428734715028 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle