| Protein: | taf-11.3 |
| Organism: | Caenorhabditis elegans |
| Length: | 196 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf-11.3.
| Description | E-value | Query Range |
Subject Range |
|
|
235.0 | [0..2] | [195..15] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MSSEEDEIAE LSKDTPPEKK RKISESGASS SSFIPESTSE ESLSLKSKKS GSRKRILTAS 60
61 SSTNSIAMKS SASWIQEKDT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-196] |
1 11 21 31 41 51
| | | | | |
1 PINKSDEEKS IAESLLIANF SNEQLDRYTA FKRSRFNRRI IKNVITRTTG QIPSDPLALA 60
61 VAGLTKMFIG DLVEEAVELR GALNEQDRPV QPYHITRAFD KLLAEGKLWP PYGAKY
|
| Detection Method: | |
| Confidence: | 38.09691 |
| Match: | 1bh8B |
| Description: | TAF(II)28 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.73700145395396 | bayes_pls_golite062009 |
| DNA binding | 1.04127970884713 | bayes_pls_golite062009 |
| nucleic acid binding | 0.86554830065808 | bayes_pls_golite062009 |
| transcription regulator activity | 0.57702121108343 | bayes_pls_golite062009 |
| protein binding | 0.260428734715028 | bayes_pls_golite062009 |
