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Protein Overview: nhr-117

General Information:
Name(s) found: nhr-117 / CE30756 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00003707 locus:nhr-117 status:Confirmed UniProt:O44638 protein_id:CCD69578.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    steroid hormone receptor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNSIDFCSA SSSTSSNYSS PPAVLDIDQV LEKCQICYQP GHGYHFGAFI CRACAAFFRR  60
   61 CHFSLALDQR KCRLLSGSCQ PNKNGRWFCK KCRFDKCLEL GMTTTNIQYD RDAFKSSASF 120
  121 LKNKSVAKRV ADRVSVPMQF SSNQRHVIYN VKNVFQTPPT ALGKAGRTLD ETDQRILCQN 180
  181 TVESALGINP IMIFTYADEN KQFPFIDISQ LVDKALSSIL TPISVRKIKK MSNLEQLTQG 240
  241 LDEFQWTQKE SVSQIVRLSA NDHLNDFQTY MCAAAKWLSY SDRIRNLDDE LKIQILQCIW 300
  301 FNWGRLERIA TTAKMRNKRK CGKKQFVFSN NILLDYDEMS SDLSFWSNYT FEEMKYFFIP 360
  361 TEMFYDEVIC EMEEVQPDNM ETTFIISLMC FHLTGKQFGG QVQEEMDQLQ DLLSDELHEY 420
  421 YLKKNMTMYS LRLKQLMKIK EKFLKLRYKR CEKYKIAGIF EAFHTNLSNP EFFMIPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] PSI-BLAST 23.69897 Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter
    2 View Details [187..477] PSI-BLAST 43.39794 No description for 2gl8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle