| Protein: | nhr-117 |
| Organism: | Caenorhabditis elegans |
| Length: | 477 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-117.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..1] | [476..23] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MQNSIDFCSA SSSTSSNYSS PPAVLDIDQV LEKCQICYQP GHGYHFGAFI CRACAAFFRR 60
61 CHFSLALDQR KCRLLSGSCQ PNKNGRWFCK KCRFDKCLEL GMTTTNIQYD RDAFKSSASF 120
121 LKNKSVAKRV ADRVSVPMQF SSNQRHVIYN VKNVFQTPPT ALGKAGRTLD ETDQRILCQN 180
181 TVESAL
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [187-477] |
1 11 21 31 41 51
| | | | | |
1 GINPIMIFTY ADENKQFPFI DISQLVDKAL SSILTPISVR KIKKMSNLEQ LTQGLDEFQW 60
61 TQKESVSQIV RLSANDHLND FQTYMCAAAK WLSYSDRIRN LDDELKIQIL QCIWFNWGRL 120
121 ERIATTAKMR NKRKCGKKQF VFSNNILLDY DEMSSDLSFW SNYTFEEMKY FFIPTEMFYD 180
181 EVICEMEEVQ PDNMETTFII SLMCFHLTGK QFGGQVQEEM DQLQDLLSDE LHEYYLKKNM 240
241 TMYSLRLKQL MKIKEKFLKL RYKRCEKYKI AGIFEAFHTN LSNPEFFMIP A
|
| Detection Method: | |
| Confidence: | 43.39794 |
| Match: | 2gl8A |
| Description: | No description for 2gl8A was found. |
