Protein Overview: CE31479

General Information:
Name(s) found:	CE31479 [WormBase]
Description(s) found: Found 19 descriptions. SHOW ALL	WBGene00008852 locus:ubql-1 status:Confirmed UniProt:G5EC78 protein_id:CAD44115.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	484 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA]
Biological Process:	protein modification process [IEA] nucleotide-excision repair [IEA]
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATESALIKV HVKSPSNKYD VEIAADASVS ELKDKVLVFV PTANKEQVCI IYTGKILKDE  60
   61 ETLTQHKIAD GHTVHLVIRN QARPTPAPAA ATPTASSAPT MGGMGSPADI LNNPDAMRSV 120
  121 MDNPITQQLL GNPEFMRTII QSNPQFQALI ERNPEVGHIL NDPNVMRQTM EMIRNPNMFQ 180
  181 EMMRNHDQAI RNLQGIPGGE AALERLYNDV QEPLLNSATN SLSGNPFASL RGDQSSEPRV 240
  241 DRAGQENNEA LPNPWASNAN QATNNQSNNR SADFNSLLDS PGISSLMEQM MSNPSMQASM 300
  301 FSPEVINSIR QNMSNNPGLI DSIVGQIPSA RDNPQISEGI RRSFPQMLNM MSDPSVMEAM 360
  361 RNPRVSEAFR QIQEGFSTLR REAPQLLNLF QAGAMGGGAF GSDANASSAG ANSANGLADL 420
  421 FNSMNMGGGR PSSTAAPVNP EQTYASQLEQ LQSMGFSDRA RNVAALTATF GDLNAAVERL 480
  481 LNSP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..85]	PSI-BLAST	16.30103	Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3)
2	View Details	[86..247]	FFAS03	1.33	No description for 2qsfX was found.
3	View Details	[248..403]	PSI-BLAST	5.39794	Sec24
4	View Details	[404..484]	PSI-BLAST	9.0	Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
small conjugating protein ligase activity	3.1015291294575	bayes_pls_golite062009
ubiquitin-protein ligase activity	2.66488876049395	bayes_pls_golite062009
binding	2.35732272412639	bayes_pls_golite062009
acid-amino acid ligase activity	2.21945212115988	bayes_pls_golite062009
protein tag	2.15059229834935	bayes_pls_golite062009
protein binding	1.86841453215444	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	1.25223828115784	bayes_pls_golite062009
transcription regulator activity	0.82919698244809	bayes_pls_golite062009
nucleic acid binding	0.744068636783535	bayes_pls_golite062009
DNA binding	0.635408380268467	bayes_pls_golite062009
SUMO ligase activity	0.412533160717297	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.0816453389356582	bayes_pls_golite062009
protein kinase activity	0.038557482883633	bayes_pls_golite062009
kinase activity	0.0363894273406812	bayes_pls_golite062009

2

No functions predicted.

3

No functions predicted.

4

Term	Confidence	Notes
binding	1.97462588597633	bayes_pls_golite062009
protein binding	1.07513578953037	bayes_pls_golite062009
transcription regulator activity	0.975058929011586	bayes_pls_golite062009
nucleic acid binding	0.964788761596736	bayes_pls_golite062009
ubiquitin binding	0.83381750627184	bayes_pls_golite062009
small conjugating protein binding	0.831998937773351	bayes_pls_golite062009
DNA binding	0.778785306874919	bayes_pls_golite062009
catalytic activity	0.25774924710417	bayes_pls_golite062009
small conjugating protein-specific protease activity	0.172026786640155	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle