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Protein Overview: kcnl-1

General Information:
Name(s) found: kcnl-1 / CE31871 [WormBase]
Description(s) found:
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  • WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:Q8I4D2 protein_id:CAD54169.1 [WormBase]
  • gi|32566969|ref|NP_872183.1| hypothetical protein B0399.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|24817595|emb|CAD54169.1| C. elegans protein B0399.1c, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31871 WBGene00007176 status:Confirmed TR:Q8I4D2 protein_id:CAD54169.1 [wormpep150.fasta]
  • 31871 WBGene00007176 status:Confirmed TR:Q8I4D2 protein_id:CAD54169.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • calcium-activated SK potassium channel and Calmodulin binding domain containing protein family member (5U79) [Caenorhabditis elegans]gi|24817595|emb|CAD54169.1| Hypothetical protein B0399.1c [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q8I4D2 protein_id:CAD54169.1 [wormpep115.fasta.reversed]
  • CE31871 WBGene00007176 status:Confirmed UniProt:Q8I4D2_CAEEL protein_id:CAD54169.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31871 WBGene00007176 status:Confirmed UniProt:Q8I4D2_CAEEL protein_id:CAD54169.1| [wormORF-contam.fasta]
  • B0399.1c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein B0399.1c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31871 WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:Q8I4D2 protein_id:CAD54169.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31871 WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:Q8I4D2_CAEEL protein_id:CAD54169.1 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • Isoform of G5EFI1, KCNN (Potassium K ChaNNel, calcium activated)-Like OS=Caenorhabditis elegans GN=kcnl-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: calcium-activated potassium channel activity [IEALink to PubMed article]
    calmodulin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFTRKTIV DTIFFFFDDS TAKMRCRLRK QLFIRRNKVC DISLFLAVLG LLLVIIDSEL  60
   61 TALSSSTGIT KDSPISIILR SACVVSTFFL ICCLINYHAI EVKIALIDSG ADDWRVAFST 120
  121 DRFIKMLIEV CVCMICPFPE IFSDGLMKMP YINADTRQVK MRDVPIDVLL SVPMFLRSYL 180
  181 VCRFMVLHSK QFQDAATRSI AALNRISMDF RFVIKTMMAD HPLRVLIVFT LSYWMCMSWM 240
  241 FTQCERYDGQ LEVEHYYLNS MWFIMVTFMS IGYGDIVPNT YCGRCLSITT GIVGAGVSSA 300
  301 LIAIISRKLE LSRAEKHVNN FMADSKLTNQ RKNAAASVLQ ETWFIHKYKK ALHKGDDLRL 360
  361 RHHQRRFLHS INEFRRIKWD QRKLQEKGNS LLDVGKLHSD MHETLWEMHR TQDHFISQID 420
  421 VLTQKIMELQ MTLNTRPPCC APPTSSSNDA YFSTSTQLGT VLPTVIPTIP LPPTQSPMLH 480
  481 ASQSHREPLQ VTTTTTTSSD GLPRISVGST SSTATSASSG NGSLPQCTVD QLSNCPTGGI 540
  541 YATVTTPLIS NFEEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..376] PSI-BLAST 47.154902 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [377..555] PSI-BLAST 13.69897 No description for 2q0aA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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