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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFTRKTIV DTIFFFFDDS TAKMRCRLRK QLFIRRNKVC DISLFLAVLG LLLVIIDSEL  60
   61 TALSSSTGIT KDSPISIILR SACVVSTFFL ICCLINYHAI EVKIALIDSG ADDWRVAFST 120
  121 DRFIKMLIEV CVCMICPFPE IFSDGLMKMP YINADTRQVK MRDVPIDVLL SVPMFLRSYL 180
  181 VCRFMVLHSK QFQDAATRSI AALNRISMDF RFVIKTMMAD HPLRVLIVFT LSYWMCMSWM 240
  241 FTQCERYDGQ LEVEHYYLNS MWFIMVTFMS IGYGDIVPNT YCGRCLSITT GIVGAGVSSA 300
  301 LIAIISRKLE LSRAEKHVNN FMADSKLTNQ RKNAAASVLQ ETWFIHKYKK ALHKGDDLRL 360
  361 RHHQRRFLHS INEFRRIKWD QRKLQEKGNS LLDVGKLHSD MHETLWEMHR TQDHFISQID 420
  421 VLTQKIMELQ MTLNTRPPCC APPTSSSNDA YFSTSTQLGT VLPTVIPTIP LPPTQSPMLH 480
  481 ASQSHREPLQ VTTTTTTSSD GLPRISVGST SSTATSASSG NGSLPQCTVD QLSNCPTGGI 540
  541 YATVTTPLIS NFEEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle