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Protein Overview: kcnl-1

General Information:
Name(s) found: kcnl-1 / CE31869 [WormBase]
Description(s) found:
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  • WBGene00007176 locus:kcnl-1 status:Partially_confirmed UniProt:G5EFI1 protein_id:CAB03807.2 [WormBase]
  • gi|32566965|ref|NP_507800.2| hypothetical protein B0399.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|24817599|emb|CAA21625.2| C. elegans protein B0399.1a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|23954181|emb|CAB03807.2| C. elegans protein B0399.1a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31869 WBGene00007176 status:Partially_confirmed TR:Q9XTJ3 protein_id:CAA21625.2 [wormpep150.fasta]
  • 31869 WBGene00007176 status:Partially_confirmed TR:Q9XTJ3 protein_id:CAA21625.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • calcium-activated SK potassium channel and Calmodulin binding domain containing protein family member (5U79) [Caenorhabditis elegans]gi|23954181|emb|CAB03807.2| Hypothetical protein B0399.1a [Caenorhabditis elegans]gi|24817599|emb|CAA21625.2| Hypothetic [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9XTJ3 protein_id:CAA21625.2 [wormpep115.fasta.reversed]
  • CE31869 WBGene00007176 status:Partially_confirmed UniProt:Q9XTJ3_CAEEL protein_id:CAB03807.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31869 WBGene00007176 status:Partially_confirmed UniProt:Q9XTJ3_CAEEL protein_id:CAB03807.2| [wormORF-contam.fasta]
  • Hypothetical protein B0399.1a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • B0399.1a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31869 WBGene00007176 locus:kcnl-1 status:Partially_confirmed UniProt:Q9XTJ3 protein_id:CAB03807.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31869 WBGene00007176 locus:kcnl-1 status:Partially_confirmed UniProt:Q9XTJ3_CAEEL protein_id:CAB03807.2 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • CE31869 WBGene00007176 locus:kcnl-1 status:Partially_confirmed UniProt:G5EFI1 protein_id:CAB03807.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • KCNN (Potassium K ChaNNel, calcium activated)-Like OS=Caenorhabditis elegans GN=kcnl-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 792 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: calcium-activated potassium channel activity [IEALink to PubMed article]
    calmodulin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRASSYCQ MDDRIPFLTP QLNSHSHSRL SAETEATSGN TLSSSLSTIP ITGQKFATPP  60
   61 NRVLVKGHTV STCSPRFGST SIPAPLDRRQ GRSCEFHTSD DDRHDRYDNP IAQMNSDDSE 120
  121 SPLNRRKTEP KRVLGTKNGS LSVTPGEKNE GRDRAFSMYS VSSDILRVSG YTQQFRSLLT 180
  181 ARFSPRREST PDVTVEAPED ENKNDDRYVN GGVRFDNDVI EEGTASGAAS GGVGTPKKIA 240
  241 GFRRRQSGYG IAISSDSTAK MRCRLRKQLF IRRNKVCDIS LFLAVLGLLL VIIDSELTAL 300
  301 SSSTGITKDS PISIILRSAC VVSTFFLICC LINYHAIEVK IALIDSGADD WRVAFSTDRF 360
  361 IKMLIEVCVC MICPFPEIFS DGLMKMPYIN ADTRQVKMRD VPIDVLLSVP MFLRSYLVCR 420
  421 FMVLHSKQFQ DAATRSIAAL NRISMDFRFV IKTMMADHPL RVLIVFTLSY WMCMSWMFTQ 480
  481 CERYDGQLEV EHYYLNSMWF IMVTFMSIGY GDIVPNTYCG RCLSITTGIV GAGVSSALIA 540
  541 IISRKLELSR AEKHVNNFMA DSKLTNQRKN AAASVLQETW FIHKYKKALH KGDDLRLRHH 600
  601 QRRFLHSINE FRRIKWDQRK LQEKGNSLLD VGKLHSDMHE TLWEMHRTQD HFISQIDVLT 660
  661 QKIMELQMTL NTRPPCCAPP TSSSNDAYFS TSTQLGTVLP TVIPTIPLPP TQSPMLHASQ 720
  721 SHREPLQVTT TTTTSSDGLP RISVGSTSST ATSASSGNGS LPQCTVDQLS NCPTGGIYAT 780
  781 VTTPLISNFE EV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] deduced N/A No confident structure predictions are available.
    2 View Details [187..623] PSI-BLAST 62.69897 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [624..728] PSI-BLAST 7.221849 Inward rectifier potassium channel Kirbac1.1
    4 View Details [729..792] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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