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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRASSYCQ MDDRIPFLTP QLNSHSHSRL SAETEATSGN TLSSSLSTIP ITGQKFATPP  60
   61 NRVLVKGHTV STCSPRFGST SIPAPLDRRQ GRSCEFHTSD DDRHDRYDNP IAQMNSDDSE 120
  121 SPLNRRKTEP KRVLGTKNGS LSVTPGEKNE GRDRAFSMYS VSSDILRVSG YTQQFRSLLT 180
  181 ARFSPRREST PDVTVEAPED ENKNDDRYVN GGVRFDNDVI EEGTASGAAS GGVGTPKKIA 240
  241 GFRRRQSGYG IAISSDSTAK MRCRLRKQLF IRRNKVCDIS LFLAVLGLLL VIIDSELTAL 300
  301 SSSTGITKDS PISIILRSAC VVSTFFLICC LINYHAIEVK IALIDSGADD WRVAFSTDRF 360
  361 IKMLIEVCVC MICPFPEIFS DGLMKMPYIN ADTRQVKMRD VPIDVLLSVP MFLRSYLVCR 420
  421 FMVLHSKQFQ DAATRSIAAL NRISMDFRFV IKTMMADHPL RVLIVFTLSY WMCMSWMFTQ 480
  481 CERYDGQLEV EHYYLNSMWF IMVTFMSIGY GDIVPNTYCG RCLSITTGIV GAGVSSALIA 540
  541 IISRKLELSR AEKHVNNFMA DSKLTNQRKN AAASVLQETW FIHKYKKALH KGDDLRLRHH 600
  601 QRRFLHSINE FRRIKWDQRK LQEKGNSLLD VGKLHSDMHE TLWEMHRTQD HFISQIDVLT 660
  661 QKIMELQMTL NTRPPCCAPP TSSSNDAYFS TSTQLGTVLP TVIPTIPLPP TQSPMLHASQ 720
  721 SHREPLQVTT TTTTSSDGLP RISVGSTSST ATSASSGNGS LPQCTVDQLS NCPTGGIYAT 780
  781 VTTPLISNFE EV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle