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Protein Overview: soc-2

General Information:
Name(s) found: soc-2 / CE31275 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004929 locus:soc-2 Leucine-rich repeat protein soc-2 status:Confirmed UniProt:Q22875 protein_id:CCD61152.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 558 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: muscle organ development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    fibroblast growth factor receptor signaling pathway [IGILink to PubMed article]
    regulation of cell projection organization [IMPLink to PubMed article]
    organ morphogenesis [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLQKLGFC LEKQKRETPP TTANTGVSAT KRVSVIATDR DRAYFLRQKN MRNNKGHAEK  60
   61 DLLKEFHKCK EAQDQRLDLS SIEITSIPSP IKELTQLTEL FLYKNKLTCL PTEIGQLVNL 120
  121 KKLGLSENAL TSLPDSLASL ESLETLDLRH NKLTEVPSVI YKIGSLETLW LRYNRIVAVD 180
  181 EQIGNLSKLK MLDVRENKIR ELPSAIGKLT SLVVCLVSYN HLTRVPEEIG DCHSLTQLDL 240
  241 QHNDLSELPY SIGKLVNLVR IGIRYNKIRC IPSELESCQQ LEEFIVESNH LQLLPPNLLT 300
  301 MLPKIHTVNL SRNELTAFPA GGPQQFVSTV TINMEHNQIS KIPIGIFSKA TRLTKLNLKE 360
  361 NELVSLPLDM GSWTSITELN LSTNQLKVLP EDIEKLVNLE ILVLSNNQLK KLPNQIGNLN 420
  421 KLRELDLEEN ELETVPTEIG FLQHLTKLWV QSNKILTLPR SIGNLCSLQD LRLGENNLTA 480
  481 IPEEIGHLDS LKSLYLNDNS SLHNLPFELA LCQSLEIMSI ENSPLSQIPP EITAGGPSLV 540
  541 IQYLKMQGPY RGVVMNSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..558] PSI-BLAST 46.09691 The molecular structure of toll-like receptor 3 ligand binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle