| Protein: | soc-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 558 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for soc-2.
| Description | E-value | Query Range |
Subject Range |
|
|
433.0 | [0..1] | [557..85] |
|
Region A: Residues: [1-558] |
1 11 21 31 41 51
| | | | | |
1 MRVLQKLGFC LEKQKRETPP TTANTGVSAT KRVSVIATDR DRAYFLRQKN MRNNKGHAEK 60
61 DLLKEFHKCK EAQDQRLDLS SIEITSIPSP IKELTQLTEL FLYKNKLTCL PTEIGQLVNL 120
121 KKLGLSENAL TSLPDSLASL ESLETLDLRH NKLTEVPSVI YKIGSLETLW LRYNRIVAVD 180
181 EQIGNLSKLK MLDVRENKIR ELPSAIGKLT SLVVCLVSYN HLTRVPEEIG DCHSLTQLDL 240
241 QHNDLSELPY SIGKLVNLVR IGIRYNKIRC IPSELESCQQ LEEFIVESNH LQLLPPNLLT 300
301 MLPKIHTVNL SRNELTAFPA GGPQQFVSTV TINMEHNQIS KIPIGIFSKA TRLTKLNLKE 360
361 NELVSLPLDM GSWTSITELN LSTNQLKVLP EDIEKLVNLE ILVLSNNQLK KLPNQIGNLN 420
421 KLRELDLEEN ELETVPTEIG FLQHLTKLWV QSNKILTLPR SIGNLCSLQD LRLGENNLTA 480
481 IPEEIGHLDS LKSLYLNDNS SLHNLPFELA LCQSLEIMSI ENSPLSQIPP EITAGGPSLV 540
541 IQYLKMQGPY RGVVMNSQ
|
| Detection Method: |  |
| Confidence: | 46.09691 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
