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Protein Overview: csp-1

General Information:
Name(s) found: csp-1 / CE30017 [WormBase]
Description(s) found:
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  • WBGene00000819 locus:csp-1 status:Partially_confirmed UniProt:G5EBN4 protein_id:CAD18880.1 [WormBase]
  • gi|71998305|ref|NP_001022454.1| CaSPase family member (csp-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|4063372|gb|AAC98294.1| caspase-related protein 1C [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_741056.1| caspase (16.9 kD) (csp-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|17645994|emb|CAD18880.1| C. elegans protein Y48E1B.13c, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • pir||T43637 caspase protein 1C - Caenorhabditis elegans [NCBI NR]
  • [wormpep79.fasta]
  • CE30017 WBGene00000819 locus:csp-1 C14 peptidase status:Partially_confirmed TR:Q9Y056 protein_id:CAD18880.1 [wormpep150.fasta]
  • 30017 WBGene00000819 locus:csp-1 C14 peptidase status:Predicted TR:Q9Y056 protein_id:CAD18880.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • caspase (16.9 kD) (csp-1) [Caenorhabditis elegans]gi|17645994|emb|CAD18880.1| Hypothetical protein Y48E1B.13c [Caenorhabditis elegans]gi|4063372|gb|AAC98294.1| caspase-related protein 1C [Caenorhabditis elegans]gi|11359736|pir||T43637 caspase protein 1 [nrdb_11152004_Chlamydomonas]
  • CE30017 WBGene00000819 locus:csp-1 C14 peptidase status:Predicted TR:Q9Y056 protein_id:CAD18880.1 [wormpep132.fasta]
  • 30017 WBGene00000819 locus:csp-1 C14 peptidase status:Partially_confirmed TR:Q9Y056 protein_id:CAD18880.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • C14 peptidase status:Partially_confirmed TR:Q9Y056 protein_id:CAD18880.1 [wormpep115.fasta.reversed]
  • CE30017 C14 peptidase status:Partially_confirmed protein_id:CAD18880.1 [wormpep80.hongbin]
  • CE30017 WBGene00000819 locus:csp-1 C14 peptidase status:Partially_confirmed UniProt:Q9Y056_CAEEL protein_id:CAD18880.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30017 WBGene00000819 locus:csp-1 C14 peptidase status:Partially_confirmed UniProt:Q9Y056_CAEEL protein_id:CAD18880.1| [wormORF-contam.fasta]
  • Hypothetical protein Y48E1B.13c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • caspase-related protein 1C [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CaSPase family member (csp-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30017 WBGene00000819 locus:csp-1 C14 peptidase status:Partially_confirmed UniProt:Q9Y056 protein_id:CAD18880.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE30017 WBGene00000819 locus:csp-1 C14 peptidase status:Partially_confirmed UniProt:G5EBN4 protein_id:CAD18880.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE30017 WBGene00000819 locus:csp-1 status:Partially_confirmed UniProt:G5EBN4 protein_id:CAD18880.1 [wormpep246-ecoli-contam.fasta]
  • Isoform of G5EBM1, CaSPase OS=Caenorhabditis elegans GN=csp-1 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    apoptosis [IEALink to PubMed article]
    Molecular Function: caspase activity [IEALink to PubMed article]
    cysteine-type peptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRTDAKKSN HKHKYCYEMN SNPRGTVLIL SNENFKNMER RVGTKQDEVN LTKLFQKLQY  60
   61 TVICKRNLEA ESMLEAIKEF AEMAHTDSII LFLLSHGDGA GSVFGIDDMP VNVMEVSTYL 120
  121 AYHQNLLLKP KWVAVSACRG GKIEHGCSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 37.522879 No description for 2j30A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle