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Protein Overview: rme-1

General Information:
Name(s) found: rme-1 / CE30204 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q8WSP1 protein_id:CCD72162.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    endomembrane system [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: receptor-mediated endocytosis [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    protein binding [TASLink to PubMed article]
    GTPase activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCQLCRPTV TDEDIDKTLV IFRKKSTNPF EKTSERFSST NPFGGEIEEG QKKKKTRSMF  60
   61 SWLGGDSSKK KNKEVLETVS EGLRKIYKQK LLPLEEFHKF HDFHSPALDD PDFDAKPMIL 120
  121 LVGQYSTGKT TFIRYLLESD FPGIRIGPEP TTDRFIAVMH GDEEGSIPGN ALVVDAKKQF 180
  181 RALSGFGNAF LNRFQCSTLP NQVLESVTIV DTPGILSGEK QRIDRGYDFT GVLEWFAERV 240
  241 DRIILLFDAH KLDISDEFKR CIEALAGNED KIRIVLNKSD MVDHQQLMRV YGALMWSLGK 300
  301 VFKTPEVSRV YLGSFWDHPL HYDLNRRLFQ DEQHDLFQDL QALPRNAALR KLNDLIKRAR 360
  361 LAKVHAYIIA ELRKQMPSMI GKDKKKKDLI QNLDKIYEQL QREHNISPGD FPDVNKMREK 420
  421 LQTQDFSKFN PLKPKLLEVV DGMLATDIAR LMAQIPKEEA AAPAGSNGSA DPTVRGGAFS 480
  481 QTTEAETPFG FGRGEGFDKG ADEAEWVVSR ERTTADSTFE SLGPVNGYLS GRAAKEHMVK 540
  541 SKLPNSVLGK VWKLADIDKD GQLDADEFAL ANYLINLKLE GHEIPSELPK HLIPPSKRGE 600
  601 QDPVYPSLND NDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..55] PSI-BLAST 48.0 No description for 2hjgA was found.
    2 View Details [56..613] PSI-BLAST 97.30103 No description for 2qptA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle