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Protein Overview: snf-3

General Information:
Name(s) found: snf-3 / CE30176 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00004902 locus:snf-3 Transporter status:Confirmed UniProt:G5EBN9 protein_id:CCD63487.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 600 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: neurotransmitter transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter:sodium symporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSEHVPLP TDEAKAKELE QSQHSEEPDR GQWTGKFDFL MSMVAYAVGL GNVWRFPYLC  60
   61 YKNGGGSFLV VYMIFFCLAA VPIFLMEVTV GQYLQKGAME MWLMCPLFRG VGIGNVVIAF 120
  121 MCIAYFCVIV AWAMFYMISS IAWVFPWETC NNYWNDATCV TGKENFTELA RIKALVASAG 180
  181 GHTQTSVEQF WEKRVLHDTG DISEFGGIQW ELFFIMAAAW LIVYFALWKG ITQARKFVYF 240
  241 CALFPYVLIF ILLIRGLTLE GAGTGIYFYL KPNATRLLDT AVWKDAGTQV FYSYGVGFGA 300
  301 LIALGSHNKF NHNCFKDAIT MCFINGCTSI TAGFAVFSIL GYMSHVAQKD ISEIVKPGVG 360
  361 LAFLAYPEVA SNLPMKQVFA VLFFLMITIL GLDSQVCMME GLFTALEDAF PILRKYKKQS 420
  421 LGIFCLFFFC IGIPMVTHSG SHWLTLFDAY GASGYALLFV VFFEVVGLAY GFGAHNIRKA 480
  481 LHEMIGVTLP KGIEYVWKFC APATSLVLFV FCVVYYHPVK YPDGKDFPFW ANAFGWFLSS 540
  541 CSMVVIPGYA IYYLFFTNKH LTLKERVRKG LNLDGSFESP AKKNLVNNAE ELKFIESSSQ 600
  601

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..600] PSI-BLAST 52.154902 Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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