| Protein: | snf-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 600 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for snf-3.
| Description | E-value | Query Range |
Subject Range |
|
|
545.0 | [0..6] | [592..274] |
|
Region A: Residues: [1-600] |
1 11 21 31 41 51
| | | | | |
1 MGTSEHVPLP TDEAKAKELE QSQHSEEPDR GQWTGKFDFL MSMVAYAVGL GNVWRFPYLC 60
61 YKNGGGSFLV VYMIFFCLAA VPIFLMEVTV GQYLQKGAME MWLMCPLFRG VGIGNVVIAF 120
121 MCIAYFCVIV AWAMFYMISS IAWVFPWETC NNYWNDATCV TGKENFTELA RIKALVASAG 180
181 GHTQTSVEQF WEKRVLHDTG DISEFGGIQW ELFFIMAAAW LIVYFALWKG ITQARKFVYF 240
241 CALFPYVLIF ILLIRGLTLE GAGTGIYFYL KPNATRLLDT AVWKDAGTQV FYSYGVGFGA 300
301 LIALGSHNKF NHNCFKDAIT MCFINGCTSI TAGFAVFSIL GYMSHVAQKD ISEIVKPGVG 360
361 LAFLAYPEVA SNLPMKQVFA VLFFLMITIL GLDSQVCMME GLFTALEDAF PILRKYKKQS 420
421 LGIFCLFFFC IGIPMVTHSG SHWLTLFDAY GASGYALLFV VFFEVVGLAY GFGAHNIRKA 480
481 LHEMIGVTLP KGIEYVWKFC APATSLVLFV FCVVYYHPVK YPDGKDFPFW ANAFGWFLSS 540
541 CSMVVIPGYA IYYLFFTNKH LTLKERVRKG LNLDGSFESP AKKNLVNNAE ELKFIESSSQ 600
601
|
| Detection Method: |  |
| Confidence: | 52.154902 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
