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Protein Overview: CE30102

General Information:
Name(s) found: CE30102 [WormBase]
Description(s) found:
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  • WBGene00019888 locus:snpc-1.4 status:Confirmed UniProt:Q21747 protein_id:CCD69269.1 [WormBase]
  • gi|25147884|ref|NP_740981.1| hypothetical protein R05F9.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17976536|gb|AAA83171.2| Hypothetical protein R05F9.1b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep79.fasta]
  • CE30102 WBGene00019888 status:Confirmed TR:Q21747 protein_id:AAA83171.2 [wormpep150.fasta]
  • 30102 WBGene00019888 status:Confirmed TR:Q21747 protein_id:AAA83171.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • k+ channel tetramerisation containing protein (64.4 kD) (2F201) [Caenorhabditis elegans]gi|17976536|gb|AAA83171.2| Hypothetical protein R05F9.1b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q21747 protein_id:AAA83171.2 [wormpep115.fasta.reversed]
  • CE30102 status:Partially_confirmed TR:Q21747 protein_id:AAA83171.2 [wormpep80.hongbin]
  • CE30102 WBGene00019888 status:Confirmed UniProt:Q21747_CAEEL protein_id:AAA83171.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30102 WBGene00019888 status:Confirmed UniProt:Q21747_CAEEL protein_id:AAA83171.2| [wormORF-contam.fasta]
  • Hypothetical protein R05F9.1b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • R05F9.1b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE30102 WBGene00019888 status:Confirmed UniProt:Q21747 protein_id:AAA83171.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30102 WBGene00019888 status:Confirmed UniProt:Q21747 protein_id:CCD69269.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE30102 WBGene00019888 locus:btbd-10 status:Confirmed UniProt:Q21747 protein_id:CCD69269.1 [wormbase_c_elegans_ws234_and_mcherry_10-06-2012_reversed.fasta]
  • BTB/POZ Domain-containing protein homolog OS=Caenorhabditis elegans GN=btbd-10 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 588 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: voltage-gated potassium channel activity [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSEEQNKD IPSSSNFGNP ANNGVNVPDA PARRLFDNTS DESDVSLDND DKTGAETDGS  60
   61 SSSRGCLKSE RSRKDHASTS STRTVRAPQQ VSWSFGAKPA TPHSQPPAGL KKVPAYSATS 120
  121 SSSQAGPSAS TSTARKSSLV GGRGSASSSG HTSPSPSESP ARNAGCSSSG ESNPDRSLTT 180
  181 PPLAPALKHS AKDGHYRGQR SMSLGGPAHE MLMSQLGGRQ GNTVDCSPGE GDKVCLLVDQ 240
  241 TRFLVSQRLL TSKPDTMLGR MFSMRASCGD LGADLVSPNE RDEFEVADGM TSSCFRAILD 300
  301 YYQSGTMRCP SSVSVSELRE ACDYLLVPFN AQTVKCQNLH ALLHELSNEG AREQFSQFLE 360
  361 EIILPQLVAS TEHGERECHL VVLLDDDVVD WDDEYPPQMG EETTHVVYST HLYKFFKYAE 420
  421 NRDCAKQVLK ERGLKKIRLG MEGYPTHKEK IKKRFNKAEV IYNYVQRPFV HCSWEKEEAR 480
  481 SRHVDFACPI VKSKSNPSLA AAASDPLPQP APLQQQHRVA VFGEAAPLAA HNRVDDQHFV 540
  541 QPLNQLMQQQ AQLPQNNAML GVNVQQQQHN HPLHSPPVNF QRNDREEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] MSA 13.139996 View MSA. No confident structure predictions are available.
    2 View Details [182..428] PSI-BLAST 48.0 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [429..588] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle