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Protein Overview: CE30604

General Information:
Name(s) found: CE30604 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00015814 status:Confirmed UniProt:Q8MNV6 protein_id:CCD63231.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: arginine metabolic process [IEALink to PubMed article]
    ectoine biosynthetic process [IEALink to PubMed article]
    tetrapyrrole biosynthetic process [IEALink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    biotin biosynthetic process [IEALink to PubMed article]
    gamma-aminobutyric acid metabolic process [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    4-aminobutyrate transaminase activity [IEALink to PubMed article]
    transaminase activity [IEALink to PubMed article]
    glutamate-1-semialdehyde 2,1-aminomutase activity [IEALink to PubMed article]
    diaminobutyrate-pyruvate transaminase activity [IEALink to PubMed article]
    adenosylmethionine-8-amino-7-oxononanoate transaminase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSLRRVVP SLPRGSRSLT SQQIFDREKK FGCHNYKPLP VALSKGEGCF VWDVEGKKYF  60
   61 DFLAAYSAVN QGHCHPKLLK DNEAVVVFAE NNFWGRSIAA ISASTDPDSF ARFGPFVPGF 120
  121 KTVPYNNLKA VEDAIKDKNV AAFMVEPIQG EAGVVLPDPG YLKGVSDLCK KYNVLFITDE 180
  181 VQSGLGRSGK LLAHYHDNVR PDIVVLGKAL SGGFYPVSAV LCDDNVMMNI KPGEHGSTYG 240
  241 GNPLACKVAI AALEILQEEK LVENSAVMGD LLMSKLKTLP KDIVSTVRGK GLFCAIVINK 300
  301 KYDAWKVCLK LKENGLLAKN THGDIIRFAP PLCINKEQVE QAADIIIKTV TDFAKQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..357] PSI-BLAST 83.154902 Ornithine aminotransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  2.30133284041702 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
    		•  1.4383564662931 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.50269055590758 bayes_pls_golite062009
  • N-succinyltransferase activity
    		•  0.29885541951044 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.2609065149092 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  0.15024612852051 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  0.15024612852051 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle