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View Structure Prediction Details

Protein: CE30604
Organism: Caenorhabditis elegans
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30604.

Description E-value Query
Range
Subject
Range
ARGD_THETN - Acetylornithine aminotransferase OS=Thermoanaerobacter tengcongensis GN=argD PE=3 SV=1
ARGD_CALS4 - Acetylornithine aminotransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 1...
325.0 [0..4] [354..44]

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Predicted Domain #1
Region A:
Residues: [1-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSLRRVVP SLPRGSRSLT SQQIFDREKK FGCHNYKPLP VALSKGEGCF VWDVEGKKYF  60
   61 DFLAAYSAVN QGHCHPKLLK DNEAVVVFAE NNFWGRSIAA ISASTDPDSF ARFGPFVPGF 120
  121 KTVPYNNLKA VEDAIKDKNV AAFMVEPIQG EAGVVLPDPG YLKGVSDLCK KYNVLFITDE 180
  181 VQSGLGRSGK LLAHYHDNVR PDIVVLGKAL SGGFYPVSAV LCDDNVMMNI KPGEHGSTYG 240
  241 GNPLACKVAI AALEILQEEK LVENSAVMGD LLMSKLKTLP KDIVSTVRGK GLFCAIVINK 300
  301 KYDAWKVCLK LKENGLLAKN THGDIIRFAP PLCINKEQVE QAADIIIKTV TDFAKQN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.154902
Match: 1gbnA
Description: Ornithine aminotransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
L-aspartate:2-oxoglutarate aminotransferase activity 2.30133284041702 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity 1.4383564662931 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
transferase activity 0.737426388870721 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.50269055590758 bayes_pls_golite062009
N-succinyltransferase activity 0.29885541951044 bayes_pls_golite062009
N-acyltransferase activity 0.2609065149092 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 0.15024612852051 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 0.15024612852051 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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