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Protein Overview: gar-1

General Information:
Name(s) found: gar-1 / CE29666 [WormBase]
Description(s) found:
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  • WBGene00001517 locus:gar-1 Probable muscarinic acetylcholine receptor gar-1 status:Confirmed UniProt:Q18007 protein_id:CCD64566.1 [WormBase]
  • gi|71983361|ref|NP_001024401.1| G-protein-linked Acetylcholine Receptor family member (gar-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|4249642|gb|AAD13747.1| G protein-linked acetylcholine receptor GAR-1b [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_741816.1| g-protein-linked acetylcholine receptor, muscarinic (76.8 kD) (gar-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|16950386|gb|AAL32209.1|U23529_5 G-protein-linked acetylcholine receptor protein 1, isoform a [Caenorhabditis elegans] [NCBI NR]
  • pir||T43292 G protein-linked acetylcholine receptor - Caenorhabditis elegans [NCBI NR]
  • [wormpep79.fasta]
  • CE29666 WBGene00001517 locus:gar-1 Muscarinic acetycholine receptor status:Confirmed SW:Q18007 protein_id:AAL32209.1 [wormpep150.fasta]
  • 29666 WBGene00001517 locus:gar-1 Muscarinic acetycholine receptor status:Confirmed SW:Q18007 protein_id:AAL32209.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • g-protein-linked acetylcholine receptor, muscarinic (76.8 kD) (gar-1) [Caenorhabditis elegans]gi|16950386|gb|AAL32209.1| G-protein-linked acetylcholine receptor protein 1, isoform a [Caenorhabditis elegans]gi|4249642|gb|AAD13747.1| G protein-linked acet [nrdb_11152004_Chlamydomonas]
  • locus:gar-1 Muscarinic acetycholine receptor status:Confirmed SW:Q18007 protein_id:AAL32209.1 [wormpep115.fasta.reversed]
  • CE29666 locus:gar-1 Muscarinic acetycholine receptor status:Confirmed [wormpep80.hongbin]
  • CE29666 WBGene00001517 locus:gar-1 Muscarinic acetycholine receptor status:Confirmed UniProt:Q18007 protein_id:AAL32209.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29666 WBGene00001517 locus:gar-1 Muscarinic acetycholine receptor status:Confirmed UniProt:Q18007 protein_id:AAL32209.1| [wormORF-contam.fasta]
  • G-protein-linked Acetylcholine Receptor family member (gar-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • G protein-linked acetylcholine receptor GAR-1b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • G-protein-linked acetylcholine receptor protein 1, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Isoform A of Probable muscarinic acetylcholine receptor gar-1 OS=Caenorhabditis elegans GN=gar-1 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • CE29666 WBGene00001517 locus:gar-1 Muscarinic acetycholine receptor status:Confirmed UniProt:Q18007 protein_id:CCD64566.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29666 WBGene00001517 locus:gar-1 status:Confirmed UniProt:Q18007 protein_id:CCD64566.1 Probable muscarinic acetylcholine receptor gar-1 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q18007, Isoform A of Probable muscarinic acetylcholine receptor gar-1 OS=Caenorhabditis elegans GN=gar-1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 682 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IDALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: synaptic transmission, cholinergic [IDALink to PubMed article]
    G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: G-protein coupled acetylcholine receptor activity [IDALink to PubMed article]
    rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNYTVPPDP ADTSWDSPYS IPVQIVVWII IIVLSLETII GNAMVVMAYR IERNISKQVS  60
   61 NRYIVSLAIS DLIIGIEGFP FFTVYVLNGD RWPLGWVACQ TWLFLDYTLC LVSILTVLLI 120
  121 TADRYLSVCH TAKYLKWQSP TKTQLLIVMS WLLPAIIFGI MIYGWQAMTG QSTSMSGAEC 180
  181 SAPFLSNPYV NMGMYVAYYW TTLVAMLILY KGIHQAAKNL EKKAKAKERR HIALILSQRL 240
  241 GTQVGVSLML QSKAEKEKAE EAQKDSGYTS NQAGGSLNTE NDQNLGVIEE ERSGFLSRRE 300
  301 SNESYYPGPH PTAANSRRCS EMEKVSLLSE SDGVPSTRPA KSYGRLSLRS RYSASESITT 360
  361 THENDEKEVE KADSLQKLFA DDELGSVLNF KEEKLKNTDS NNDSDTTSVI LQRSRKYKKN 420
  421 KRPRSSRRSE HSTPRQIAKV KQAEGTAAQL IEESVPDDDQ TETIEVKRTD RWVVSMKKRI 480
  481 ARALIRRRST TRPERGSSSN SDDSSSEVEG EEKPEVRNNG LKIPQLTVNN ENRGETSSQP 540
  541 GRDRLAPPNK TDTFLSASGV SRKISTISTV ITREKVISSI FAPIAVFNRG RKQTKAEKRA 600
  601 HKAFRTITFI VGFFAILWSP YYIMATVYGF CKGECIPSFL YTLSYYMCYL NSSGNPFAYA 660
  661 LANRQFRSAF MRMFRGNFNK VA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..397] FFAS03 7.86 Rhodopsin
    2 View Details [398..505] deduced N/A No confident structure predictions are available.
    3 View Details [506..682] PSI-BLAST 39.0 No description for 2j4yA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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